Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NBPDDGDH_130 | 33669 | 35594 | tet(Q) | ARO:3000191 | tet(Q) | 96.10 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NBPDDGDH_130 | 33669 | 35594 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 96.83 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NBPDDGDH_130 | 33669 | 35591 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_063856409.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NBPDDGDH_42 | 1741 | 2420 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NBPDDGDH_1 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_2 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_3 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_4 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_5 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_6 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_7 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_8 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_9 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_10 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_11 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_12 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_13 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_14 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_15 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_16 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_17 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_18 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_19 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_20 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_21 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_22 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_23 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_24 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_25 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_26 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_27 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_28 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_29 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_30 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_31 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_32 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_33 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_34 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_35 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_36 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_37 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_38 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_39 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_40 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_41 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_42 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_43 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_44 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_45 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_46 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_47 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_48 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_50 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_51 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_52 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_53 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_54 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_55 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_56 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_57 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_58 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_59 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_60 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_61 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_62 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_63 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_64 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_65 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_66 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_67 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_68 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_70 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_71 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_72 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_73 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_74 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_75 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_76 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_77 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_78 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_79 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_80 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_81 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_82 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_83 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_84 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_85 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_87 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_88 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_89 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_99 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_109 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_110 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_111 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_112 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_113 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_114 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_115 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_116 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_117 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_118 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_119 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_120 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_121 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_122 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_123 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_124 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_125 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_126 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_127 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_128 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_129 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_130 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_131 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_132 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_133 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_134 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_135 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_136 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_137 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_138 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_139 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_140 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_141 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_142 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_143 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_144 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_145 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_146 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_147 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_148 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_149 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_150 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_151 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_152 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_153 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_154 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_155 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_156 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_157 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_158 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_159 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_160 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_161 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_162 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_163 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_164 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_165 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_166 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_167 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_168 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_169 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_170 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_171 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_172 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_173 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_174 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_175 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_176 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_177 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_178 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_179 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_180 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_181 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_182 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_183 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_184 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_185 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_186 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_187 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_188 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_189 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_190 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_191 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_192 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_193 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_194 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_195 | 1.0 | 0.0 | 1.0 |
| NBPDDGDH_196 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_197 | 0.0 | 1.0 | 0.0 |
| NBPDDGDH_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)