Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PBEIFFKE_30 | 4316 | 6289 | tet(Q) | ARO:3000191 | tet(Q) | 98.63 | 100.00 | Z21523.1 |
| PBEIFFKE_190 | 2953 | 3843 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PBEIFFKE_30 | 4316 | 6241 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.01 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PBEIFFKE_190 | 2956 | 3843 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| PBEIFFKE_30 | 4319 | 6241 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PBEIFFKE_1 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_2 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_3 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_4 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_5 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_6 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_7 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_8 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_9 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_10 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_11 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_12 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_13 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_14 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_15 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_16 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_17 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_18 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_19 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_20 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_21 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_22 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_23 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_24 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_25 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_26 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_27 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_28 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_29 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_30 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_31 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_33 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_34 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_35 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_36 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_37 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_38 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_39 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_40 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_41 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_42 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_43 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_44 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_45 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_46 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_47 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_48 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_49 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_50 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_51 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_52 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_53 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_54 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_55 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_56 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_57 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_58 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_59 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_60 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_61 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_62 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_63 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_64 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_65 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_66 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_67 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_68 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_69 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_70 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_71 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_72 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_73 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_74 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_75 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_76 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_77 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_78 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_79 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_80 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_81 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_82 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_83 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_84 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_86 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_87 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_88 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_89 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_90 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_91 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_92 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_93 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_94 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_95 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_99 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_107 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_108 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_109 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_110 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_111 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_112 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_113 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_114 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_115 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_116 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_117 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_118 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_119 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_120 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_121 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_122 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_123 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_124 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_125 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_126 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_127 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_128 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_129 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_130 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_131 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_132 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_133 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_134 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_135 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_136 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_137 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_138 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_139 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_140 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_141 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_142 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_143 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_144 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_145 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_146 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_147 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_148 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_149 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_150 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_151 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_152 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_153 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_154 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_155 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_156 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_157 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_158 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_159 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_160 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_161 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_162 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_163 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_164 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_165 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_166 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_167 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_168 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_169 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_170 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_171 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_172 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_173 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_174 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_175 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_176 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_177 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_178 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_179 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_180 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_181 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_182 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_183 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_184 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_185 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_186 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_187 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_188 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_189 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_190 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_191 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_192 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_193 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_194 | 0.0 | 1.0 | 0.0 |
| PBEIFFKE_195 | 1.0 | 0.0 | 1.0 |
| PBEIFFKE_196 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)