Probiotic potential risk score


ARGs VFs PGs PPRS
3003.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
PHJBGPKJ_183103032955tet(Q)ARO:3000191tet(Q)98.7597.56Z21523.1
PHJBGPKJ_4111512317tet(X)ARO:3000205tet(X)99.74100.00M37699.1
PHJBGPKJ_413938ErmFARO:3000498ErmF99.62116.92M17124.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
PHJBGPKJ_41138938erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S100.00100.00M17808
PHJBGPKJ_4111512317tet(X)Doxycycline, Tetracycline, Minocycline, Tigecycline99.91100.00M37699
PHJBGPKJ_183103032955tet(Q)Doxycycline, Tetracycline, Minocycline99.01100.00Z21523

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
PHJBGPKJ_41138935erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)EXACTX100.00100.00WP_002682030.1
PHJBGPKJ_4111542317tet(X2)tetracycline-inactivating monooxygenase Tet(X2)BLASTX99.74100.00WP_008651082.1
PHJBGPKJ_183103332955tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX98.75100.00WP_002560998.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
PHJBGPKJ_10.01.00.0
PHJBGPKJ_20.01.00.0
PHJBGPKJ_30.01.00.0
PHJBGPKJ_40.01.00.0
PHJBGPKJ_50.01.00.0
PHJBGPKJ_60.01.00.0
PHJBGPKJ_70.01.00.0
PHJBGPKJ_80.01.00.0
PHJBGPKJ_90.01.00.0
PHJBGPKJ_100.01.00.0
PHJBGPKJ_110.01.00.0
PHJBGPKJ_120.01.00.0
PHJBGPKJ_130.01.00.0
PHJBGPKJ_140.01.00.0
PHJBGPKJ_150.01.00.0
PHJBGPKJ_160.01.00.0
PHJBGPKJ_170.01.00.0
PHJBGPKJ_180.01.00.0
PHJBGPKJ_190.01.00.0
PHJBGPKJ_200.01.00.0
PHJBGPKJ_210.01.00.0
PHJBGPKJ_220.01.00.0
PHJBGPKJ_230.01.00.0
PHJBGPKJ_240.01.00.0
PHJBGPKJ_250.01.00.0
PHJBGPKJ_260.01.00.0
PHJBGPKJ_270.01.00.0
PHJBGPKJ_280.01.00.0
PHJBGPKJ_290.01.00.0
PHJBGPKJ_301.00.01.0
PHJBGPKJ_310.01.00.0
PHJBGPKJ_320.01.00.0
PHJBGPKJ_330.01.00.0
PHJBGPKJ_340.01.00.0
PHJBGPKJ_350.01.00.0
PHJBGPKJ_360.01.00.0
PHJBGPKJ_370.01.00.0
PHJBGPKJ_381.00.01.0
PHJBGPKJ_390.01.00.0
PHJBGPKJ_401.00.01.0
PHJBGPKJ_411.00.01.0
PHJBGPKJ_420.01.00.0
PHJBGPKJ_430.01.00.0
PHJBGPKJ_440.01.00.0
PHJBGPKJ_451.00.01.0
PHJBGPKJ_461.00.01.0
PHJBGPKJ_471.00.01.0
PHJBGPKJ_481.00.01.0
PHJBGPKJ_490.01.00.0
PHJBGPKJ_501.00.01.0
PHJBGPKJ_510.01.00.0
PHJBGPKJ_521.00.01.0
PHJBGPKJ_531.00.01.0
PHJBGPKJ_541.00.01.0
PHJBGPKJ_550.01.00.0
PHJBGPKJ_571.00.01.0
PHJBGPKJ_580.01.00.0
PHJBGPKJ_590.01.00.0
PHJBGPKJ_660.01.00.0
PHJBGPKJ_690.01.00.0
PHJBGPKJ_700.01.00.0
PHJBGPKJ_710.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
PHJBGPKJ_338736692627FalseUnknownVOG4755,
PHJBGPKJ_70152404160397FalseSiphoviridaeVOG0204,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements