Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGEAPAED_261 | 105454 | 106191 | ErmB | ARO:3000375 | ErmB | 98.78 | 98.79 | AF242872.1 |
| OGEAPAED_188 | 46497 | 47633 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| OGEAPAED_188 | 45328 | 46284 | ErmF | ARO:3000498 | ErmF | 99.62 | 119.55 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OGEAPAED_188 | 45484 | 46284 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| OGEAPAED_188 | 46497 | 47663 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| OGEAPAED_261 | 105454 | 106191 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.59 | 100.00 | U18931 |
| OGEAPAED_261 | 99795 | 101012 | mef(A) | Erythromycin, Azithromycin | 94.99 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OGEAPAED_188 | 45484 | 46281 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| OGEAPAED_188 | 46500 | 47663 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| OGEAPAED_261 | 105457 | 106191 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
| OGEAPAED_261 | 99792 | 101012 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.53 | 99.75 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OGEAPAED_1 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_2 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_3 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_4 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_5 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_6 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_7 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_8 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_9 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_10 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_11 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_12 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_13 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_14 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_15 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_16 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_17 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_18 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_19 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_20 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_21 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_22 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_23 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_24 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_25 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_26 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_27 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_28 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_29 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_30 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_31 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_32 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_33 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_34 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_35 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_36 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_37 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_38 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_39 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_40 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_41 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_42 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_43 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_44 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_45 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_46 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_47 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_48 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_49 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_50 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_51 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_52 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_53 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_54 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_55 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_56 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_57 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_58 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_59 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_60 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_61 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_62 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_63 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_64 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_65 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_66 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_67 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_69 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_70 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_71 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_72 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_73 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_74 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_75 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_76 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_77 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_78 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_79 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_80 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_81 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_82 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_83 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_84 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_85 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_86 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_87 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_88 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_89 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_90 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_91 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_92 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_93 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_94 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_95 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_96 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_97 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_98 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_99 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_100 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_101 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_102 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_103 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_104 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_105 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_106 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_107 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_108 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_109 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_110 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_111 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_112 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_113 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_114 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_115 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_116 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_117 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_118 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_119 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_120 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_121 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_122 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_123 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_124 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_125 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_126 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_127 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_128 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_129 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_130 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_131 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_132 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_133 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_134 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_135 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_137 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_138 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_139 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_140 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_141 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_142 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_143 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_144 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_145 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_146 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_147 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_148 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_149 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_150 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_151 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_152 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_153 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_154 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_155 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_156 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_157 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_158 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_159 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_160 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_161 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_162 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_163 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_164 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_165 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_166 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_167 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_168 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_169 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_170 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_171 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_172 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_173 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_174 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_177 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_188 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_199 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_210 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_216 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_217 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_218 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_219 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_220 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_221 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_222 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_223 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_224 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_225 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_226 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_227 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_228 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_229 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_230 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_231 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_232 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_233 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_234 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_235 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_236 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_237 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_238 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_239 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_240 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_241 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_242 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_243 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_244 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_245 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_246 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_247 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_248 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_249 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_250 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_251 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_252 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_253 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_254 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_255 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_256 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_257 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_258 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_259 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_260 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_261 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_262 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_263 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_264 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_265 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_266 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_267 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_268 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_269 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_270 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_271 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_272 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_273 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_274 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_275 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_276 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_277 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_278 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_279 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_280 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_281 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_282 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_283 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_284 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_285 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_286 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_287 | 1.0 | 0.0 | 1.0 |
| OGEAPAED_288 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_289 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_290 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_291 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_292 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_293 | 0.0 | 1.0 | 0.0 |
| OGEAPAED_294 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OGEAPAED_284 | 9100 | 16985 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)