Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FHNBDPIP_42 | 19130 | 20020 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| FHNBDPIP_50 | 58 | 2032 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FHNBDPIP_50 | 106 | 2031 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FHNBDPIP_42 | 19130 | 20017 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| FHNBDPIP_50 | 106 | 2028 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FHNBDPIP_1 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_2 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_3 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_4 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_5 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_6 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_7 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_8 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_9 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_10 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_11 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_12 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_13 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_14 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_15 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_16 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_17 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_18 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_19 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_20 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_21 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_22 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_23 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_24 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_25 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_26 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_27 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_28 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_29 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_30 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_31 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_32 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_33 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_34 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_35 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_36 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_37 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_38 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_39 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_40 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_41 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_42 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_43 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_44 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_45 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_46 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_47 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_48 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_49 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_50 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_51 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_52 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_53 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_54 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_55 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_56 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_57 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_58 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_59 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_60 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_61 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_63 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_64 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_65 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_66 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_67 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_68 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_69 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_70 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_71 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_72 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_73 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_74 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_75 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_76 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_77 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_79 | 1.0 | 0.0 | 1.0 |
| FHNBDPIP_85 | 0.0 | 1.0 | 0.0 |
| FHNBDPIP_86 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)