Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
NNCPJABM_127091852709889WalR1.75e-113transcriptional regulatory protein84.25100.00EPH95667

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
NNCPJABM_122316582232593rep28936 / 936100.00CP005948
NNCPJABM_11420092883rep38876 / 90399.43CP005943
NNCPJABM_113304741331574repUS731101 / 110194.37CP002654

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
NNCPJABM_10.01.00.0
NNCPJABM_21.00.01.0
NNCPJABM_31.00.01.0
NNCPJABM_41.00.01.0
NNCPJABM_51.00.01.0
NNCPJABM_61.00.01.0
NNCPJABM_71.00.01.0
NNCPJABM_131.00.01.0
NNCPJABM_221.00.01.0
NNCPJABM_231.00.01.0
NNCPJABM_241.00.01.0
NNCPJABM_251.00.01.0
NNCPJABM_261.00.01.0
NNCPJABM_271.00.01.0
NNCPJABM_281.00.01.0
NNCPJABM_290.01.00.0
NNCPJABM_301.00.01.0
NNCPJABM_311.00.01.0
NNCPJABM_320.01.00.0
NNCPJABM_331.00.01.0
NNCPJABM_340.01.00.0
NNCPJABM_351.00.01.0
NNCPJABM_391.00.01.0
NNCPJABM_401.00.01.0
NNCPJABM_411.00.01.0
NNCPJABM_421.00.01.0
NNCPJABM_431.00.01.0
NNCPJABM_441.00.01.0
NNCPJABM_451.00.01.0
NNCPJABM_461.00.01.0
NNCPJABM_471.00.01.0
NNCPJABM_501.00.01.0
NNCPJABM_611.00.01.0
NNCPJABM_791.00.01.0
NNCPJABM_801.00.01.0
NNCPJABM_811.00.01.0
NNCPJABM_821.00.01.0
NNCPJABM_831.00.01.0
NNCPJABM_941.00.01.0
NNCPJABM_961.00.01.0
NNCPJABM_971.00.01.0
NNCPJABM_1011.00.01.0
NNCPJABM_1021.00.01.0
NNCPJABM_1031.00.01.0
NNCPJABM_1040.01.00.0
NNCPJABM_1051.00.01.0
NNCPJABM_1061.00.01.0
NNCPJABM_1071.00.01.0
NNCPJABM_1081.00.01.0
NNCPJABM_1101.00.01.0
NNCPJABM_1111.00.01.0
NNCPJABM_1121.00.01.0
NNCPJABM_1131.00.01.0
NNCPJABM_1141.00.01.0
NNCPJABM_1151.00.01.0
NNCPJABM_1161.00.01.0
NNCPJABM_1171.00.01.0
NNCPJABM_1181.00.01.0
NNCPJABM_1191.00.01.0
NNCPJABM_1201.00.01.0
NNCPJABM_1211.00.01.0
NNCPJABM_1221.00.01.0
NNCPJABM_1251.00.01.0
NNCPJABM_1261.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
NNCPJABM_19851251015047FalseSiphoviridaeVOG6540, VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4153, VOG4841, VOG0198, VOG9671, VOG0634, VOG3643, VOG0044, VOG4693, VOG11024, VOG0189, VOG4566, VOG0514
NNCPJABM_113050321315420FalseSiphoviridaeVOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG0205, VOG6414, VOG4609, VOG4632

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements