Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FMBCDIAA_4120765122075808WalR1.75e-113transcriptional regulatory protein84.25100.00EPH95667

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
FMBCDIAA_4125533472554282rep28936 / 936100.00CP005948
FMBCDIAA_4113425171343391rep38876 / 90399.43CP005943
FMBCDIAA_4144805580repUS731101 / 110194.37CP002654

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
FMBCDIAA_11.00.01.0
FMBCDIAA_21.00.01.0
FMBCDIAA_51.00.01.0
FMBCDIAA_61.00.01.0
FMBCDIAA_70.01.00.0
FMBCDIAA_81.00.01.0
FMBCDIAA_91.00.01.0
FMBCDIAA_101.00.01.0
FMBCDIAA_111.00.01.0
FMBCDIAA_191.00.01.0
FMBCDIAA_201.00.01.0
FMBCDIAA_211.00.01.0
FMBCDIAA_221.00.01.0
FMBCDIAA_231.00.01.0
FMBCDIAA_240.01.00.0
FMBCDIAA_251.00.01.0
FMBCDIAA_261.00.01.0
FMBCDIAA_291.00.01.0
FMBCDIAA_301.00.01.0
FMBCDIAA_311.00.01.0
FMBCDIAA_321.00.01.0
FMBCDIAA_331.00.01.0
FMBCDIAA_341.00.01.0
FMBCDIAA_410.01.00.0
FMBCDIAA_521.00.01.0
FMBCDIAA_601.00.01.0
FMBCDIAA_621.00.01.0
FMBCDIAA_631.00.01.0
FMBCDIAA_641.00.01.0
FMBCDIAA_651.00.01.0
FMBCDIAA_681.00.01.0
FMBCDIAA_691.00.01.0
FMBCDIAA_701.00.01.0
FMBCDIAA_711.00.01.0
FMBCDIAA_721.00.01.0
FMBCDIAA_731.00.01.0
FMBCDIAA_741.00.01.0
FMBCDIAA_751.00.01.0
FMBCDIAA_781.00.01.0
FMBCDIAA_791.00.01.0
FMBCDIAA_801.00.01.0
FMBCDIAA_811.00.01.0
FMBCDIAA_821.00.01.0
FMBCDIAA_831.00.01.0
FMBCDIAA_841.00.01.0
FMBCDIAA_851.00.01.0
FMBCDIAA_861.00.01.0
FMBCDIAA_870.01.00.0
FMBCDIAA_881.00.01.0
FMBCDIAA_891.00.01.0
FMBCDIAA_901.00.01.0
FMBCDIAA_951.00.01.0
FMBCDIAA_961.00.01.0
FMBCDIAA_971.00.01.0
FMBCDIAA_981.00.01.0
FMBCDIAA_991.00.01.0
FMBCDIAA_1001.00.01.0
FMBCDIAA_1011.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
FMBCDIAA_41757246787168FalseSiphoviridaeVOG6540, VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4153, VOG4841, VOG0198, VOG9671, VOG0634, VOG3643, VOG0044, VOG4693, VOG11024, VOG0189, VOG4566, VOG0514
FMBCDIAA_4110776371087397FalseSiphoviridaeVOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG0205, VOG6414, VOG4609

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements