Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
EEDJKDBP_28478152478856WalR1.64e-113transcriptional regulatory protein84.25100.00EPH95667

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
EEDJKDBP_286271562rep28936 / 936100.00CP005948
EEDJKDBP_611746418338rep38876 / 90399.43CP005943
EEDJKDBP_721506316163repUS731101 / 110194.37CP002654

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
EEDJKDBP_11.00.01.0
EEDJKDBP_21.00.01.0
EEDJKDBP_51.00.01.0
EEDJKDBP_61.00.01.0
EEDJKDBP_71.00.01.0
EEDJKDBP_81.00.01.0
EEDJKDBP_91.00.01.0
EEDJKDBP_100.01.00.0
EEDJKDBP_111.00.01.0
EEDJKDBP_121.00.01.0
EEDJKDBP_141.00.01.0
EEDJKDBP_151.00.01.0
EEDJKDBP_161.00.01.0
EEDJKDBP_171.00.01.0
EEDJKDBP_180.01.00.0
EEDJKDBP_191.00.01.0
EEDJKDBP_280.01.00.0
EEDJKDBP_291.00.01.0
EEDJKDBP_301.00.01.0
EEDJKDBP_311.00.01.0
EEDJKDBP_321.00.01.0
EEDJKDBP_331.00.01.0
EEDJKDBP_391.00.01.0
EEDJKDBP_411.00.01.0
EEDJKDBP_421.00.01.0
EEDJKDBP_431.00.01.0
EEDJKDBP_441.00.01.0
EEDJKDBP_451.00.01.0
EEDJKDBP_501.00.01.0
EEDJKDBP_611.00.01.0
EEDJKDBP_641.00.01.0
EEDJKDBP_650.01.00.0
EEDJKDBP_661.00.01.0
EEDJKDBP_671.00.01.0
EEDJKDBP_680.01.00.0
EEDJKDBP_721.00.01.0
EEDJKDBP_781.00.01.0
EEDJKDBP_791.00.01.0
EEDJKDBP_800.01.00.0
EEDJKDBP_811.00.01.0
EEDJKDBP_821.00.01.0
EEDJKDBP_831.00.01.0
EEDJKDBP_841.00.01.0
EEDJKDBP_851.00.01.0
EEDJKDBP_861.00.01.0
EEDJKDBP_871.00.01.0
EEDJKDBP_881.00.01.0
EEDJKDBP_891.00.01.0
EEDJKDBP_901.00.01.0
EEDJKDBP_911.00.01.0
EEDJKDBP_921.00.01.0
EEDJKDBP_931.00.01.0
EEDJKDBP_941.00.01.0
EEDJKDBP_951.00.01.0
EEDJKDBP_1021.00.01.0
EEDJKDBP_1031.00.01.0
EEDJKDBP_1041.00.01.0
EEDJKDBP_1051.00.01.0
EEDJKDBP_1061.00.01.0
EEDJKDBP_1071.00.01.0
EEDJKDBP_1081.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
EEDJKDBP_2815196091526586FalseSiphoviridaeVOG6414, VOG0205, VOG4581, VOG4544, VOG2935, VOG4556
EEDJKDBP_2818169551846877FalseSiphoviridaeVOG0514, VOG4566, VOG0189, VOG11024, VOG4693, VOG0044, VOG3643, VOG0634, VOG9671, VOG0198, VOG4841, VOG4153, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG5904, VOG4605, VOG4599, VOG10957, VOG8870, VOG9998

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements