Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FEMIIIIH_97 | 25235 | 25041 | CspA | 4.90e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEMIIIIH_11 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_21 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_32 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_43 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_54 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_65 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_76 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_87 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_97 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_108 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_109 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_120 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_130 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_141 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_151 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_162 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_173 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_183 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_194 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_205 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_215 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_216 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_217 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_218 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_219 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_220 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_221 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_222 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_223 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_224 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_225 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_226 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_227 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_228 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_229 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_230 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_231 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_232 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_233 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_234 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_235 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_236 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_237 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_238 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_239 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_240 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_241 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_242 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_243 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_244 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_245 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_246 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_247 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_248 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_249 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_250 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_251 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_252 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_253 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_254 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_255 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_256 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_257 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_258 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_260 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_261 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_262 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_263 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_264 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_265 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_266 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_267 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_268 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_269 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_271 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_272 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_274 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_275 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_276 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_277 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_278 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_279 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_280 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_281 | 1.0 | 0.0 | 1.0 |
| FEMIIIIH_282 | 0.0 | 1.0 | 0.0 |
| FEMIIIIH_293 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEMIIIIH_65 | 3523 | 29109 | False | Siphoviridae | VOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047, VOG7438, VOG0052, VOG5410, VOG4548, VOG11003 |
Phigaro v2.4.0 (Database: Jan. 2024 release)