Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDANMOFE_57 | 28858 | 29562 | WalR | 2.81e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FDANMOFE_61 | 17754 | 17951 | CspR | 5.07e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FDANMOFE_11 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_22 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_33 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_42 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_43 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_44 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_45 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_46 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_47 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_48 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_49 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_50 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_51 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_52 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_53 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_54 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_55 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_56 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_57 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_58 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_59 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_60 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_61 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_62 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_63 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_64 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_65 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_66 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_67 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_68 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_69 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_70 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_71 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_72 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_73 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_74 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_75 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_76 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_77 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_78 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_79 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_80 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_81 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_82 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_83 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_84 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_85 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_86 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_87 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_88 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_89 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_90 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_91 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_92 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_93 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_94 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_95 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_96 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_97 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_98 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_99 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_100 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_101 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_102 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_103 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_104 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_106 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_107 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_108 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_109 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_110 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_111 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_112 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_113 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_114 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_115 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_116 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_117 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_118 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_119 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_120 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_121 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_122 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_124 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_125 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_126 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_127 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_128 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_129 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_130 | 0.0 | 1.0 | 0.0 |
| FDANMOFE_132 | 1.0 | 0.0 | 1.0 |
| FDANMOFE_137 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FDANMOFE_82 | 6517 | 18831 | False | Siphoviridae | VOG10867, VOG4799, VOG0189, VOG0982, VOG5280, VOG5317, VOG3307, VOG0198, VOG5088, VOG4570, VOG4549, VOG5532 |
Phigaro v2.4.0 (Database: Jan. 2024 release)