Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BOLAJOOM_16 | 47796 | 48500 | WalR | 4.19e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BOLAJOOM_28 | 17810 | 17613 | CspR | 5.07e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BOLAJOOM_5 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_6 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_7 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_8 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_9 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_10 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_11 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_12 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_13 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_14 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_15 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_16 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_17 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_18 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_19 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_20 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_21 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_22 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_23 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_24 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_25 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_26 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_27 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_28 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_29 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_30 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_31 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_32 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_33 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_34 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_35 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_36 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_37 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_38 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_39 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_40 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_41 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_42 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_43 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_44 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_45 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_46 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_47 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_48 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_49 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_50 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_51 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_52 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_53 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_54 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_55 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_56 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_57 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_58 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_59 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_60 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_62 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_63 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_64 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_65 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_66 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_68 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_69 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_70 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_71 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_72 | 1.0 | 0.0 | 1.0 |
| BOLAJOOM_73 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_81 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_92 | 0.0 | 1.0 | 0.0 |
| BOLAJOOM_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BOLAJOOM_48 | 127290 | 139519 | True | Siphoviridae | VOG8387, VOG5532, VOG4549, VOG4570, VOG5088, VOG0198, VOG3307, VOG5317, VOG5280, VOG0982, VOG0189, VOG4799 |
Phigaro v2.4.0 (Database: Jan. 2024 release)