Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FGBLPGJJ_198 | 84250 | 84954 | WalR | 6.86e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FGBLPGJJ_209 | 84804 | 84607 | CspR | 1.34e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FGBLPGJJ_145 | 20372 | 21433 | repUS74 | 1063 / 1062 | 93.41 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FGBLPGJJ_1 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_2 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_3 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_4 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_5 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_6 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_7 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_9 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_10 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_11 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_12 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_13 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_14 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_15 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_16 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_17 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_18 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_19 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_20 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_21 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_22 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_23 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_24 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_25 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_26 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_27 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_28 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_30 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_31 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_32 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_33 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_34 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_35 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_36 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_37 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_38 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_40 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_41 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_42 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_43 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_44 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_45 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_46 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_47 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_48 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_49 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_55 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_66 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_77 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_88 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_99 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_110 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_111 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_122 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_123 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_124 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_125 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_126 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_127 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_128 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_129 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_130 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_131 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_132 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_133 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_134 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_135 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_136 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_137 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_138 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_139 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_140 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_141 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_142 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_143 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_144 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_145 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_146 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_147 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_148 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_149 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_150 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_151 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_152 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_153 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_154 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_155 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_156 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_157 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_158 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_159 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_160 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_161 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_162 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_163 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_164 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_165 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_166 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_167 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_168 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_169 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_170 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_171 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_172 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_173 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_174 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_175 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_176 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_177 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_178 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_179 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_180 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_181 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_182 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_183 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_184 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_185 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_186 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_187 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_188 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_189 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_190 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_191 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_192 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_193 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_194 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_195 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_196 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_197 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_198 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_199 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_200 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_201 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_202 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_203 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_204 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_205 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_206 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_207 | 1.0 | 0.0 | 1.0 |
| FGBLPGJJ_208 | 0.0 | 1.0 | 0.0 |
| FGBLPGJJ_209 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FGBLPGJJ_99 | 1300 | 4168 | False | Unknown | VOG0189, VOG4566, VOG0226 |
| FGBLPGJJ_139 | 5850 | 9496 | False | Siphoviridae | VOG3642, VOG10867, VOG0181, VOG10059, VOG5084 |
| FGBLPGJJ_146 | 4691 | 25361 | False | Siphoviridae | VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG9975, VOG4553, VOG4573, VOG4556, VOG5051, VOG1886, VOG4581, VOG4841, VOG4549, VOG10904, VOG4570, VOG0198, VOG2338, VOG0044, VOG3643, VOG2820, VOG4643, VOG0275, VOG0195, VOG9741, VOG4693, VOG0189 |
Phigaro v2.4.0 (Database: Jan. 2024 release)