Probiotic potential risk score


ARGs VFs PGs PPRS
0022.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FCHFEHCH_284779648500WalR4.19e-113transcriptional regulatory protein83.40100.00EPH95667
FCHFEHCH_411781017613CspR5.07e-34cold shock protein89.39100.00AAO82613

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
FCHFEHCH_110.01.00.0
FCHFEHCH_180.01.00.0
FCHFEHCH_190.01.00.0
FCHFEHCH_200.01.00.0
FCHFEHCH_210.01.00.0
FCHFEHCH_220.01.00.0
FCHFEHCH_230.01.00.0
FCHFEHCH_240.01.00.0
FCHFEHCH_250.01.00.0
FCHFEHCH_260.01.00.0
FCHFEHCH_270.01.00.0
FCHFEHCH_280.01.00.0
FCHFEHCH_290.01.00.0
FCHFEHCH_300.01.00.0
FCHFEHCH_310.01.00.0
FCHFEHCH_320.01.00.0
FCHFEHCH_331.00.01.0
FCHFEHCH_340.01.00.0
FCHFEHCH_350.01.00.0
FCHFEHCH_360.01.00.0
FCHFEHCH_370.01.00.0
FCHFEHCH_380.01.00.0
FCHFEHCH_390.01.00.0
FCHFEHCH_400.01.00.0
FCHFEHCH_410.01.00.0
FCHFEHCH_420.01.00.0
FCHFEHCH_430.01.00.0
FCHFEHCH_440.01.00.0
FCHFEHCH_450.01.00.0
FCHFEHCH_460.01.00.0
FCHFEHCH_470.01.00.0
FCHFEHCH_480.01.00.0
FCHFEHCH_490.01.00.0
FCHFEHCH_500.01.00.0
FCHFEHCH_511.00.01.0
FCHFEHCH_520.01.00.0
FCHFEHCH_531.00.01.0
FCHFEHCH_540.01.00.0
FCHFEHCH_550.01.00.0
FCHFEHCH_561.00.01.0
FCHFEHCH_571.00.01.0
FCHFEHCH_581.00.01.0
FCHFEHCH_591.00.01.0
FCHFEHCH_600.01.00.0
FCHFEHCH_611.00.01.0
FCHFEHCH_620.01.00.0
FCHFEHCH_631.00.01.0
FCHFEHCH_641.00.01.0
FCHFEHCH_651.00.01.0
FCHFEHCH_661.00.01.0
FCHFEHCH_670.01.00.0
FCHFEHCH_681.00.01.0
FCHFEHCH_691.00.01.0
FCHFEHCH_701.00.01.0
FCHFEHCH_710.01.00.0
FCHFEHCH_721.00.01.0
FCHFEHCH_731.00.01.0
FCHFEHCH_741.00.01.0
FCHFEHCH_751.00.01.0
FCHFEHCH_761.00.01.0
FCHFEHCH_791.00.01.0
FCHFEHCH_801.00.01.0
FCHFEHCH_811.00.01.0
FCHFEHCH_820.01.00.0
FCHFEHCH_831.00.01.0
FCHFEHCH_841.00.01.0
FCHFEHCH_861.00.01.0
FCHFEHCH_871.00.01.0
FCHFEHCH_881.00.01.0
FCHFEHCH_891.00.01.0
FCHFEHCH_901.00.01.0
FCHFEHCH_911.00.01.0
FCHFEHCH_920.01.00.0
FCHFEHCH_930.01.00.0
FCHFEHCH_951.00.01.0
FCHFEHCH_1040.01.00.0
FCHFEHCH_1150.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
FCHFEHCH_362456536794TrueSiphoviridaeVOG8387, VOG5532, VOG4549, VOG4570, VOG5088, VOG0198, VOG3307, VOG5317, VOG5280, VOG0982, VOG0189, VOG4799

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements