Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IMOHEEDE_1 | 109129 | 109830 | WalR | 1.98e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IMOHEEDE_36 | 3048 | 3977 | rep28 | 930 / 930 | 97.85 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMOHEEDE_1 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_2 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_3 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_4 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_5 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_6 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_7 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_8 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_9 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_10 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_11 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_12 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_13 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_14 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_15 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_16 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_17 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_18 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_19 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_20 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_21 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_22 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_23 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_24 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_25 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_26 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_27 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_28 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_29 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_30 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_31 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_32 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_33 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_34 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_35 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_36 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_37 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_38 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_39 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_40 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_41 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_42 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_43 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_44 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_45 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_46 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_47 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_48 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_49 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_50 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_51 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_52 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_53 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_54 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_55 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_56 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_57 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_58 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_59 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_60 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_61 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_62 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_64 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_66 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_67 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_68 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_69 | 1.0 | 0.0 | 1.0 |
| IMOHEEDE_77 | 0.0 | 1.0 | 0.0 |
| IMOHEEDE_86 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IMOHEEDE_11 | 4941 | 36722 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG5904, VOG6684, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG4732, VOG6970, VOG1298, VOG3724, VOG0052, VOG0189, VOG4799, VOG0514, VOG0226, VOG6394, VOG0283, VOG0321, VOG6450, VOG5039 |
| IMOHEEDE_14 | 5340 | 16957 | False | Siphoviridae | VOG8908, VOG0198, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632 |
| IMOHEEDE_14 | 24502 | 50389 | False | Myoviridae | VOG0861, VOG7896, VOG4783, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG4564, VOG1912, VOG10227, VOG0796 |
Phigaro v2.4.0 (Database: Jan. 2024 release)