Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DFHAJKDF_12 | 72532 | 76215 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 91.22 | 103.46 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DFHAJKDF_1 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_2 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_3 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_4 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_5 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_6 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_7 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_8 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_9 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_10 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_11 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_12 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_13 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_14 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_15 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_16 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_17 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_18 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_19 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_20 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_21 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_22 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_23 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_24 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_25 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_26 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_27 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_28 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_29 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_30 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_31 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_33 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_34 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_35 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_36 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_37 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_38 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_39 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_40 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_41 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_42 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_43 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_44 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_45 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_46 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_47 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_48 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_49 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_50 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_51 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_52 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_53 | 0.0 | 1.0 | 0.0 |
| DFHAJKDF_54 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_56 | 1.0 | 0.0 | 1.0 |
| DFHAJKDF_62 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DFHAJKDF_16 | 18923 | 22878 | False | Siphoviridae | VOG4602, VOG4944, VOG1229, VOG2703 |
| DFHAJKDF_16 | 28177 | 49817 | False | Siphoviridae | VOG2538, VOG2038, VOG9852, VOG1422, VOG0183, VOG1574, VOG4544, VOG0720, VOG4576, VOG4555, VOG4553, VOG0880, VOG1581, VOG3409, VOG1159, VOG4621, VOG4557, VOG3651, VOG4582, VOG4545, VOG3654, VOG0275, VOG0991 |
| DFHAJKDF_33 | 8407 | 11368 | False | Siphoviridae | VOG4602, VOG0010, VOG3304 |
| DFHAJKDF_47 | 11265 | 27574 | False | Myoviridae | VOG0384, VOG4548, VOG5689, VOG0382, VOG0052 |
Phigaro v2.4.0 (Database: Jan. 2024 release)