Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
PJKACBDO_10.01.00.0
PJKACBDO_20.01.00.0
PJKACBDO_120.01.00.0
PJKACBDO_180.01.00.0
PJKACBDO_240.01.00.0
PJKACBDO_300.01.00.0
PJKACBDO_350.01.00.0
PJKACBDO_390.01.00.0
PJKACBDO_400.01.00.0
PJKACBDO_410.01.00.0
PJKACBDO_420.01.00.0
PJKACBDO_430.01.00.0
PJKACBDO_440.01.00.0
PJKACBDO_450.01.00.0
PJKACBDO_460.01.00.0
PJKACBDO_470.01.00.0
PJKACBDO_480.01.00.0
PJKACBDO_490.01.00.0
PJKACBDO_500.01.00.0
PJKACBDO_510.01.00.0
PJKACBDO_520.01.00.0
PJKACBDO_530.01.00.0
PJKACBDO_540.01.00.0
PJKACBDO_550.01.00.0
PJKACBDO_560.01.00.0
PJKACBDO_570.01.00.0
PJKACBDO_580.01.00.0
PJKACBDO_590.01.00.0
PJKACBDO_600.01.00.0
PJKACBDO_610.01.00.0
PJKACBDO_620.01.00.0
PJKACBDO_630.01.00.0
PJKACBDO_640.01.00.0
PJKACBDO_650.01.00.0
PJKACBDO_660.01.00.0
PJKACBDO_670.01.00.0
PJKACBDO_680.01.00.0
PJKACBDO_690.01.00.0
PJKACBDO_700.01.00.0
PJKACBDO_710.01.00.0
PJKACBDO_720.01.00.0
PJKACBDO_730.01.00.0
PJKACBDO_740.01.00.0
PJKACBDO_750.01.00.0
PJKACBDO_760.01.00.0
PJKACBDO_770.01.00.0
PJKACBDO_780.01.00.0
PJKACBDO_790.01.00.0
PJKACBDO_800.01.00.0
PJKACBDO_810.01.00.0
PJKACBDO_820.01.00.0
PJKACBDO_830.01.00.0
PJKACBDO_840.01.00.0
PJKACBDO_851.00.01.0
PJKACBDO_860.01.00.0
PJKACBDO_870.01.00.0
PJKACBDO_880.01.00.0
PJKACBDO_890.01.00.0
PJKACBDO_900.01.00.0
PJKACBDO_910.01.00.0
PJKACBDO_920.01.00.0
PJKACBDO_930.01.00.0
PJKACBDO_941.00.01.0
PJKACBDO_950.01.00.0
PJKACBDO_961.00.01.0
PJKACBDO_971.00.01.0
PJKACBDO_980.01.00.0
PJKACBDO_991.00.01.0
PJKACBDO_1000.01.00.0
PJKACBDO_1010.01.00.0
PJKACBDO_1021.00.01.0
PJKACBDO_1031.00.01.0
PJKACBDO_1041.00.01.0
PJKACBDO_1050.01.00.0
PJKACBDO_1061.00.01.0
PJKACBDO_1071.00.01.0
PJKACBDO_1081.00.01.0
PJKACBDO_1090.01.00.0
PJKACBDO_1100.01.00.0
PJKACBDO_1111.00.01.0
PJKACBDO_1121.00.01.0
PJKACBDO_1131.00.01.0
PJKACBDO_1151.00.01.0
PJKACBDO_1191.00.01.0
PJKACBDO_1200.01.00.0
PJKACBDO_1211.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
PJKACBDO_40241945853TrueSiphoviridaeVOG5444,
PJKACBDO_42101480107766FalseSiphoviridaeVOG4600,
PJKACBDO_5562113878TrueUnknownVOG1047,
PJKACBDO_552263462953TrueSiphoviridaeVOG0221,
PJKACBDO_71362832418FalseSiphoviridaeVOG0641,
PJKACBDO_73733116301FalseSiphoviridaeVOG0539,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements