Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FKGMBDDL_524 | 9801 | 11726 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| FKGMBDDL_554 | 266 | 1003 | ErmB | ARO:3000375 | ErmB | 98.37 | 98.79 | AF242872.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FKGMBDDL_554 | 266 | 1003 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | U18931 |
| FKGMBDDL_524 | 9801 | 11726 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FKGMBDDL_554 | 266 | 1000 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_002292226.1 |
| FKGMBDDL_524 | 9804 | 11726 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FKGMBDDL_13 | 102675 | 104255 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FKGMBDDL_17 | 7 | 587 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FKGMBDDL_1 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_2 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_3 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_4 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_5 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_6 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_7 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_8 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_9 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_10 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_11 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_12 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_13 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_14 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_15 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_16 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_24 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_34 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_41 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_51 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_60 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_70 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_79 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_88 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_98 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_99 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_109 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_120 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_131 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_141 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_152 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_162 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_173 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_183 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_193 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_204 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_205 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_216 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_227 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_236 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_247 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_258 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_269 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_279 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_289 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_300 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_311 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_312 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_323 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_334 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_345 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_356 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_367 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_378 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_388 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_399 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_410 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_421 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_422 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_433 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_444 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_455 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_466 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_476 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_487 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_497 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_508 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_514 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_515 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_516 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_517 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_518 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_519 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_520 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_521 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_522 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_523 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_524 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_525 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_526 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_527 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_528 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_529 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_530 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_531 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_532 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_533 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_534 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_535 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_537 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_538 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_539 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_540 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_541 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_543 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_544 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_545 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_546 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_547 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_548 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_549 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_550 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_551 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_552 | 0.0 | 1.0 | 0.0 |
| FKGMBDDL_553 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_554 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_555 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_557 | 1.0 | 0.0 | 1.0 |
| FKGMBDDL_558 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FKGMBDDL_2 | 112206 | 122924 | False | Siphoviridae | VOG0327, |
| FKGMBDDL_120 | 1908 | 14851 | False | Unknown | VOG4572, |
| FKGMBDDL_131 | 6269 | 10708 | False | Unknown | VOG2165, |
| FKGMBDDL_205 | 48588 | 52163 | True | Unknown | VOG6282, |
Phigaro v2.4.0 (Database: Jan. 2024 release)