Probiotic potential risk score


ARGs VFs PGs PPRS
2002.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
KDHIMFMA_1153747138361CblA-1ARO:3002999CblA-196.28100.00GQ343019.1
KDHIMFMA_1121676618691tet(Q)ARO:3000191tet(Q)96.4197.56Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
KDHIMFMA_1121676618691tet(Q)Doxycycline, Tetracycline, Minocycline99.84100.00L33696

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
KDHIMFMA_1121676918691tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX99.53100.00WP_063856407.1
KDHIMFMA_1153747138358cblACblA family class A beta-lactamaseBLASTX96.28100.00WP_005827792.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
KDHIMFMA_10.01.00.0
KDHIMFMA_20.01.00.0
KDHIMFMA_130.01.00.0
KDHIMFMA_240.01.00.0
KDHIMFMA_350.01.00.0
KDHIMFMA_460.01.00.0
KDHIMFMA_570.01.00.0
KDHIMFMA_680.01.00.0
KDHIMFMA_790.01.00.0
KDHIMFMA_900.01.00.0
KDHIMFMA_1010.01.00.0
KDHIMFMA_1090.01.00.0
KDHIMFMA_1100.01.00.0
KDHIMFMA_1110.01.00.0
KDHIMFMA_1120.01.00.0
KDHIMFMA_1130.01.00.0
KDHIMFMA_1140.01.00.0
KDHIMFMA_1150.01.00.0
KDHIMFMA_1161.00.01.0
KDHIMFMA_1170.01.00.0
KDHIMFMA_1181.00.01.0
KDHIMFMA_1190.01.00.0
KDHIMFMA_1200.01.00.0
KDHIMFMA_1211.00.01.0
KDHIMFMA_1220.01.00.0
KDHIMFMA_1230.01.00.0
KDHIMFMA_1240.01.00.0
KDHIMFMA_1250.01.00.0
KDHIMFMA_1260.01.00.0
KDHIMFMA_1270.01.00.0
KDHIMFMA_1280.01.00.0
KDHIMFMA_1290.01.00.0
KDHIMFMA_1300.01.00.0
KDHIMFMA_1310.01.00.0
KDHIMFMA_1321.00.01.0
KDHIMFMA_1331.00.01.0
KDHIMFMA_1341.00.01.0
KDHIMFMA_1351.00.01.0
KDHIMFMA_1360.01.00.0
KDHIMFMA_1370.01.00.0
KDHIMFMA_1380.01.00.0
KDHIMFMA_1390.01.00.0
KDHIMFMA_1401.00.01.0
KDHIMFMA_1411.00.01.0
KDHIMFMA_1420.01.00.0
KDHIMFMA_1431.00.01.0
KDHIMFMA_1441.00.01.0
KDHIMFMA_1451.00.01.0
KDHIMFMA_1460.01.00.0
KDHIMFMA_1471.00.01.0
KDHIMFMA_1481.00.01.0
KDHIMFMA_1490.01.00.0
KDHIMFMA_1511.00.01.0
KDHIMFMA_1521.00.01.0
KDHIMFMA_1530.01.00.0
KDHIMFMA_1541.00.01.0
KDHIMFMA_1551.00.01.0
KDHIMFMA_1561.00.01.0
KDHIMFMA_1570.01.00.0
KDHIMFMA_1581.00.01.0
KDHIMFMA_1591.00.01.0
KDHIMFMA_1601.00.01.0
KDHIMFMA_1611.00.01.0
KDHIMFMA_1621.00.01.0
KDHIMFMA_1631.00.01.0
KDHIMFMA_1640.01.00.0
KDHIMFMA_1651.00.01.0
KDHIMFMA_1661.00.01.0
KDHIMFMA_1671.00.01.0
KDHIMFMA_1681.00.01.0
KDHIMFMA_1691.00.01.0
KDHIMFMA_1701.00.01.0
KDHIMFMA_1711.00.01.0
KDHIMFMA_1721.00.01.0
KDHIMFMA_1731.00.01.0
KDHIMFMA_1741.00.01.0
KDHIMFMA_1750.01.00.0
KDHIMFMA_1760.01.00.0
KDHIMFMA_1771.00.01.0
KDHIMFMA_1860.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
KDHIMFMA_24104147120261FalseSiphoviridaeVOG4569,
KDHIMFMA_1016792377120FalseUnknownVOG3992,
KDHIMFMA_1181096322631FalseSiphoviridaeVOG4624,
KDHIMFMA_131304607312178FalseSiphoviridaeVOG0292,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements