safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
8	0	0	8.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
AKNFLJKL_3	3854571	3856496	tet(Q)	ARO:3000191	tet(Q)	96.41	97.56	Z21523.1
AKNFLJKL_3	1073015	1074220	Mef(En2)	ARO:3004659	Mef(En2)	99.50	100.00	AF251288.1
AKNFLJKL_1	16752	17552	ErmF	ARO:3000498	ErmF	98.50	100.00	M17124.1
AKNFLJKL_1	15725	16549	OXA-347	ARO:3001777	OXA-347	100.00	100.00	JN086160.1
AKNFLJKL_1	12854	13717	aadS	ARO:3004683	aadS	100.00	100.00	M72415.1
AKNFLJKL_1	11427	12653	EreD	ARO:3004608	EreD	95.34	100.00	KP265721.1
AKNFLJKL_1	9903	11063	tet(X)	ARO:3000205	tet(X)	99.48	99.48	M37699.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
AKNFLJKL_1	15725	16549	blaOXA-347	Unknown Beta-lactam	100.00	100.00	ACWG01000053
AKNFLJKL_3	3854571	3856496	tet(Q)	Doxycycline, Tetracycline, Minocycline	99.84	100.00	L33696
AKNFLJKL_1	9903	11069	tet(X)	Doxycycline, Tetracycline, Minocycline, Tigecycline	99.83	100.00	M37699
AKNFLJKL_1	16752	17552	erm(F)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	99.50	100.00	M17808
AKNFLJKL_1	11427	12653	ere(D)	Erythromycin	96.66	100.00	KP265721

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
AKNFLJKL_1	12857	13717	aadS	aminoglycoside 6-adenylyltransferase AadS	EXACTX	100.00	100.00	WP_003013318.1
AKNFLJKL_1	15725	16546	blaOXA-347	class D beta-lactamase OXA-347	ALLELEX	100.00	100.00	WP_004295324.1
AKNFLJKL_3	1074245	1074754	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	EXACTX	100.00	100.00	WP_004308783.1
AKNFLJKL_1	9906	11069	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	EXACTX	100.00	100.00	WP_008651082.1
AKNFLJKL_3	3854574	3856496	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	BLASTX	99.53	100.00	WP_063856407.1
AKNFLJKL_3	1073015	1074217	mef(En2)	macrolide efflux MFS transporter Mef(En2)	BLASTX	99.50	100.00	WP_063853729.1
AKNFLJKL_1	16755	17552	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	BLASTX	98.87	100.00	WP_002682030.1
AKNFLJKL_1	11427	12650	ere(D)	EreD family erythromycin esterase	BLASTX	95.34	100.00	WP_015345560.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
AKNFLJKL_1	1.0	0.0	1.0
AKNFLJKL_2	1.0	0.0	1.0
AKNFLJKL_3	0.0	1.0	0.0
AKNFLJKL_4	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)