safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
8	0	0	8.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
AOMGAELO_7	5402784	5403749	CfxA4	ARO:3003005	CfxA4	100.00	100.00	AY769933.1
AOMGAELO_7	1950487	1952412	tet(Q)	ARO:3000191	tet(Q)	97.04	97.56	Z21523.1
AOMGAELO_7	1834139	1835071	CfxA4	ARO:3003005	CfxA4	99.68	96.57	AY769933.1
AOMGAELO_7	1259140	1260279	tet(X1)	ARO:3005166	tet(X1)	99.72	105.57	AJ311171.1
AOMGAELO_7	1257805	1258941	tet(X)	ARO:3000205	tet(X)	99.47	97.42	M37699.1
AOMGAELO_7	1256766	1257629	aadS	ARO:3004683	aadS	100.00	100.00	M72415.1
AOMGAELO_7	1136717	1138642	tet(Q)	ARO:3000191	tet(Q)	95.01	97.56	Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
AOMGAELO_7	5402784	5403749	cfxA4	Unknown Beta-lactam	100.00	100.00	AY769933
AOMGAELO_7	1950487	1952412	tet(Q)	Doxycycline, Tetracycline, Minocycline	100.00	100.00	X58717
AOMGAELO_7	1257805	1258971	tet(X)	Doxycycline, Tetracycline, Minocycline, Tigecycline	99.83	100.00	M37699

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
AOMGAELO_7	1256769	1257629	aadS	aminoglycoside 6-adenylyltransferase AadS	EXACTX	100.00	100.00	WP_003013318.1
AOMGAELO_7	3131564	3132469	blaMUN-1	MUN family extended-spectrum class A beta-lactamase MUN-1	ALLELEX	100.00	100.00	WP_206340447.1
AOMGAELO_7	5402784	5403746	cfxA4	extended-spectrum class A beta-lactamase CfxA4	EXACTX	100.00	100.00	WP_057280848.1
AOMGAELO_7	1950487	1952409	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	EXACTX	100.00	100.00	WP_004293868.1
AOMGAELO_7	1257808	1258971	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	EXACTX	100.00	100.00	WP_008651082.1
AOMGAELO_7	1259143	1260279	tet(X1)	tetracycline-inactivating monooxygenase Tet(X1)	BLASTX	99.74	100.00	WP_204376222.1
AOMGAELO_7	1834109	1835068	cfxA4	extended-spectrum class A beta-lactamase CfxA4	BLASTX	99.06	99.69	WP_057280848.1
AOMGAELO_7	1136720	1138642	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	BLASTX	97.04	100.00	WP_063856407.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
AOMGAELO_1	1.0	0.0	1.0
AOMGAELO_2	1.0	0.0	1.0
AOMGAELO_3	1.0	0.0	1.0
AOMGAELO_4	1.0	0.0	1.0
AOMGAELO_5	1.0	0.0	1.0
AOMGAELO_6	1.0	0.0	1.0
AOMGAELO_7	0.0	1.0	0.0
AOMGAELO_8	0.0	1.0	0.0
AOMGAELO_9	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
AOMGAELO_7	5353615	5359819	False	Unknown	VOG5023,

Phigaro v2.4.0 (Database: Jan. 2024 release)