Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EPGDGCKK_102 | 44842 | 45546 | WalR | 7.11e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EPGDGCKK_109 | 6916 | 7110 | CspR | 1.47e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EPGDGCKK_109 | 6916 | 7113 | CspA | 2.25e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EPGDGCKK_162 | 31148 | 32177 | rep38 | 1038 / 1104 | 81.60 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EPGDGCKK_1 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_2 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_4 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_5 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_6 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_7 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_8 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_9 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_10 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_11 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_12 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_13 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_14 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_15 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_16 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_17 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_18 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_19 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_20 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_21 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_22 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_23 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_24 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_25 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_26 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_28 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_29 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_30 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_31 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_32 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_33 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_35 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_36 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_37 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_38 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_39 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_40 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_41 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_42 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_43 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_44 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_45 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_46 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_47 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_48 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_49 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_51 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_52 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_53 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_54 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_55 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_56 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_58 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_61 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_62 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_63 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_64 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_66 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_67 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_69 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_72 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_77 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_79 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_87 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_92 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_93 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_94 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_95 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_97 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_98 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_99 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_100 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_101 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_102 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_103 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_104 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_105 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_106 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_107 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_108 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_109 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_110 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_111 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_112 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_113 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_114 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_115 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_116 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_117 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_118 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_119 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_120 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_121 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_122 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_123 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_124 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_125 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_126 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_127 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_128 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_129 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_130 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_131 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_132 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_133 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_134 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_135 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_136 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_137 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_138 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_139 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_140 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_141 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_142 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_143 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_144 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_145 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_146 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_147 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_148 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_149 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_150 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_151 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_152 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_154 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_155 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_156 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_157 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_158 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_159 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_160 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_161 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_162 | 1.0 | 0.0 | 1.0 |
| EPGDGCKK_163 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_164 | 0.0 | 1.0 | 0.0 |
| EPGDGCKK_166 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EPGDGCKK_41 | 1277 | 24083 | False | Siphoviridae | VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG5904, VOG4605, VOG4599, VOG10957, VOG8870 |
| EPGDGCKK_108 | 6952 | 14221 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG1886, VOG2935, VOG4556, VOG4568 |
| EPGDGCKK_115 | 1206 | 18748 | False | Siphoviridae | VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG0796 |
Phigaro v2.4.0 (Database: Jan. 2024 release)