Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MJGKEGAE_161 | 159450 | 160154 | WalR | 1.63e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MJGKEGAE_99 | 16780 | 16977 | CspR | 6.56e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MJGKEGAE_2 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_3 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_7 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_8 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_9 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_10 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_11 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_15 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_18 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_19 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_20 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_21 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_22 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_23 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_26 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_28 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_33 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_36 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_39 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_41 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_46 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_51 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_54 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_59 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_62 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_63 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_65 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_68 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_69 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_71 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_76 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_78 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_81 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_82 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_83 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_86 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_89 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_90 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_94 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_96 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_97 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_98 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_99 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_100 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_101 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_102 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_103 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_105 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_106 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_107 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_108 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_109 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_110 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_111 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_112 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_113 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_114 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_116 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_117 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_118 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_121 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_122 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_124 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_125 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_126 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_127 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_128 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_129 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_130 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_133 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_134 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_136 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_137 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_138 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_139 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_140 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_144 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_146 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_148 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_151 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_152 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_154 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_155 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_158 | 1.0 | 0.0 | 1.0 |
| MJGKEGAE_160 | 0.0 | 1.0 | 0.0 |
| MJGKEGAE_161 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MJGKEGAE_54 | 984 | 22401 | False | Siphoviridae | VOG7888, VOG7896, VOG6455, VOG4599, VOG4605, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549 |
| MJGKEGAE_94 | 76544 | 86272 | False | Siphoviridae | VOG3304, VOG0862, VOG8520, VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632 |
| MJGKEGAE_99 | 37261 | 44990 | False | Siphoviridae | VOG9667, VOG6495, VOG1305, VOG8241, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG8987, VOG11003, VOG9860, VOG6623 |
| MJGKEGAE_114 | 19278 | 26069 | False | Siphoviridae | VOG4602, VOG6495, VOG5353, VOG4552, VOG0181, VOG10867, VOG4600, VOG1309, VOG11003 |
| MJGKEGAE_161 | 82766 | 93515 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)