Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DJAFAAOJ_66 | 954 | 1151 | CspR | 1.36e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| DJAFAAOJ_66 | 954 | 1151 | CspA | 2.53e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DJAFAAOJ_1 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_2 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_3 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_4 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_5 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_7 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_10 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_11 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_12 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_13 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_15 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_16 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_17 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_18 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_20 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_21 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_22 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_24 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_25 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_26 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_27 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_28 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_29 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_30 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_32 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_33 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_34 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_35 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_36 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_38 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_39 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_41 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_42 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_43 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_44 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_45 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_46 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_51 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_53 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_54 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_55 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_56 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_57 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_58 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_59 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_61 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_62 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_63 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_64 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_65 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_66 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_67 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_69 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_71 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_72 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_74 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_75 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_76 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_77 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_78 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_79 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_84 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_85 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_86 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_88 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_89 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_90 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_92 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_93 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_95 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_98 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_99 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_102 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_103 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_104 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_106 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_107 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_108 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_111 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_114 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_115 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_125 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_126 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_127 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_128 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_130 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_131 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_135 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_138 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_143 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_151 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_152 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_153 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_155 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_156 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_163 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_173 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_177 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_179 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_182 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_183 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_184 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_185 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_187 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_189 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_191 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_192 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_196 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_197 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_198 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_199 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_201 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_203 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_204 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_205 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_207 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_209 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_211 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_212 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_214 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_215 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_216 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_217 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_218 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_219 | 1.0 | 0.0 | 1.0 |
| DJAFAAOJ_220 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_221 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_223 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_224 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_225 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_226 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_227 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_228 | 0.0 | 1.0 | 0.0 |
| DJAFAAOJ_229 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DJAFAAOJ_20 | 12849 | 20932 | False | Siphoviridae | VOG10457, VOG1176, VOG8295, VOG0025 |
| DJAFAAOJ_156 | 3998 | 25320 | False | Siphoviridae | VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047, VOG1047, VOG7438, VOG10679, VOG0052 |
Phigaro v2.4.0 (Database: Jan. 2024 release)