Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PPAJHANF_82 | 21539 | 21736 | CspR | 3.20e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| PPAJHANF_82 | 21539 | 21736 | CspA | 5.96e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PPAJHANF_1 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_2 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_4 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_6 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_8 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_9 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_10 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_11 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_12 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_13 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_14 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_15 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_17 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_18 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_19 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_20 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_21 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_23 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_25 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_26 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_28 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_29 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_31 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_32 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_33 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_36 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_37 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_40 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_41 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_42 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_46 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_48 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_49 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_50 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_51 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_52 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_53 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_54 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_56 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_58 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_60 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_61 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_63 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_64 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_68 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_73 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_75 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_77 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_80 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_82 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_84 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_88 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_93 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_94 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_96 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_97 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_98 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_99 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_103 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_107 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_109 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_110 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_113 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_114 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_115 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_116 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_120 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_122 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_124 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_127 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_131 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_132 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_134 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_135 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_136 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_138 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_139 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_141 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_143 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_145 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_146 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_148 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_149 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_150 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_151 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_152 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_154 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_155 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_156 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_158 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_160 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_161 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_162 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_163 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_164 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_165 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_166 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_167 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_168 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_170 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_171 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_172 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_173 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_175 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_178 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_179 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_180 | 1.0 | 0.0 | 1.0 |
| PPAJHANF_181 | 0.0 | 1.0 | 0.0 |
| PPAJHANF_182 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PPAJHANF_63 | 41715 | 45223 | False | Siphoviridae | VOG2703, VOG5292 |
| PPAJHANF_115 | 7803 | 37284 | False | Siphoviridae | VOG3622, VOG4552, VOG2228, VOG3929, VOG1309, VOG0186, VOG0226, VOG4799, VOG0198, VOG4841, VOG4581, VOG1886, VOG10142, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG10223, VOG5361, VOG4856, VOG4334, VOG7896 |
Phigaro v2.4.0 (Database: Jan. 2024 release)