Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IANEGIEI_198 | 6135 | 6332 | CspA | 2.72e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| IANEGIEI_198 | 6135 | 6329 | CspR | 4.93e-29 | cold shock protein | 84.61 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IANEGIEI_1 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_2 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_3 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_4 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_5 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_6 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_8 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_9 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_10 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_11 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_12 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_13 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_14 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_16 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_17 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_18 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_19 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_20 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_21 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_22 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_23 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_25 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_28 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_33 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_37 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_38 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_39 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_41 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_42 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_44 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_45 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_46 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_47 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_50 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_51 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_55 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_58 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_59 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_61 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_63 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_64 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_66 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_67 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_69 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_75 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_77 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_78 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_80 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_81 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_83 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_86 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_95 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_99 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_105 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_113 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_116 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_122 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_131 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_134 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_135 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_136 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_137 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_138 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_140 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_141 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_142 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_143 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_144 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_145 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_146 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_147 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_148 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_149 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_150 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_152 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_154 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_156 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_157 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_158 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_159 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_160 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_161 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_162 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_163 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_164 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_165 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_166 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_167 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_168 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_169 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_170 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_171 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_172 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_173 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_174 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_175 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_176 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_177 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_180 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_184 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_185 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_186 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_187 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_188 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_189 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_190 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_191 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_192 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_193 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_194 | 1.0 | 0.0 | 1.0 |
| IANEGIEI_196 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_197 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_198 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_199 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_200 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_202 | 0.0 | 1.0 | 0.0 |
| IANEGIEI_205 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IANEGIEI_20 | 6243 | 16185 | False | Myoviridae | VOG0226, VOG0205, VOG0384, VOG0382, VOG0083, VOG5235 |
| IANEGIEI_105 | 1 | 20061 | False | Siphoviridae | VOG10972, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG4317, VOG0205, VOG0204, VOG4568, VOG4556, VOG1886, VOG4581 |
| IANEGIEI_164 | 4766 | 22726 | False | Siphoviridae | VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581 |
| IANEGIEI_173 | 2453 | 18561 | False | Siphoviridae | VOG4606, VOG6545, VOG4548, VOG0322, VOG0321, VOG10904, VOG2228, VOG0041, VOG4552, VOG7581, VOG0819, VOG0275, VOG5292, VOG2703, VOG8429, VOG4690 |
Phigaro v2.4.0 (Database: Jan. 2024 release)