Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HNHKALJC_72 | 12878 | 12681 | CspA | 5.56e-30 | cold shock protein | 86.36 | 100.00 | CAA62903 |
| HNHKALJC_72 | 12878 | 12684 | CspR | 4.73e-28 | cold shock protein | 83.08 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HNHKALJC_4 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_6 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_7 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_10 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_13 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_15 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_16 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_17 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_18 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_19 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_20 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_21 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_26 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_28 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_31 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_37 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_38 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_39 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_47 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_48 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_58 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_66 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_71 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_72 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_73 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_75 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_76 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_77 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_78 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_82 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_84 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_85 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_86 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_87 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_88 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_89 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_90 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_91 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_92 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_93 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_95 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_96 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_97 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_98 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_99 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_101 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_103 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_104 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_105 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_107 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_108 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_109 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_110 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_111 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_112 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_113 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_115 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_117 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_118 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_119 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_120 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_121 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_122 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_123 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_124 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_125 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_126 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_127 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_128 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_129 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_130 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_131 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_132 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_134 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_135 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_136 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_137 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_139 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_140 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_141 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_142 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_143 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_144 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_145 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_146 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_147 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_149 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_150 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_151 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_152 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_153 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_155 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_157 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_160 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_161 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_163 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_165 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_166 | 1.0 | 0.0 | 1.0 |
| HNHKALJC_167 | 0.0 | 1.0 | 0.0 |
| HNHKALJC_170 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HNHKALJC_99 | 3918 | 33497 | False | Siphoviridae | VOG3462, VOG0801, VOG8263, VOG6698, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4581, VOG4841, VOG0249, VOG3477, VOG0198, VOG9126, VOG4693, VOG8685, VOG0189, VOG4566, VOG0550, VOG0226, VOG0186, VOG1309, VOG2228, VOG2228, VOG1518, VOG4552, VOG9667 |
Phigaro v2.4.0 (Database: Jan. 2024 release)