Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCJJCMMM_87 | 4716 | 4522 | CspA | 1.12e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCJJCMMM_3 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_4 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_5 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_6 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_7 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_8 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_11 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_13 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_14 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_17 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_19 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_22 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_25 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_26 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_30 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_32 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_36 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_39 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_44 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_46 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_58 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_59 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_60 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_61 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_62 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_63 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_64 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_65 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_66 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_67 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_68 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_69 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_70 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_71 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_72 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_73 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_74 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_75 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_76 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_77 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_78 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_79 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_80 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_81 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_82 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_83 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_84 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_85 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_86 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_87 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_88 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_89 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_90 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_91 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_92 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_93 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_94 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_96 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_97 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_102 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_103 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_104 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_105 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_108 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_109 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_110 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_112 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_113 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_114 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_121 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_125 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_126 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_131 | 1.0 | 0.0 | 1.0 |
| KCJJCMMM_132 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_133 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_136 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_137 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_138 | 0.0 | 1.0 | 0.0 |
| KCJJCMMM_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCJJCMMM_17 | 2715 | 19143 | False | Siphoviridae | VOG3462, VOG0801, VOG6163, VOG0725, VOG0799, VOG0724, VOG1353, VOG4713, VOG1329, VOG4555, VOG0638, VOG4564, VOG0720, VOG10227 |
| KCJJCMMM_26 | 87206 | 95911 | False | Siphoviridae | VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0198, VOG0204 |
| KCJJCMMM_88 | 5796 | 18838 | False | Siphoviridae | VOG6163, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG0866, VOG9312 |
Phigaro v2.4.0 (Database: Jan. 2024 release)