Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HKFGBFPE_152 | 18078 | 18272 | CspA | 4.23e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HKFGBFPE_1 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_2 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_4 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_5 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_6 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_7 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_9 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_10 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_11 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_12 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_13 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_14 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_16 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_20 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_22 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_23 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_24 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_25 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_27 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_28 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_29 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_31 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_33 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_34 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_35 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_36 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_37 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_38 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_39 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_43 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_44 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_46 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_47 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_48 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_53 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_56 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_61 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_63 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_64 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_70 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_74 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_75 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_77 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_81 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_83 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_85 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_88 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_90 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_94 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_95 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_97 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_100 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_102 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_104 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_107 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_109 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_110 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_111 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_112 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_114 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_115 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_116 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_117 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_118 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_119 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_120 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_121 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_122 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_123 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_124 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_125 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_126 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_127 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_129 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_130 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_131 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_132 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_133 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_134 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_135 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_136 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_137 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_138 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_139 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_140 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_141 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_142 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_144 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_145 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_146 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_147 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_149 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_150 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_151 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_152 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_154 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_155 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_156 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_157 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_158 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_159 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_160 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_161 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_162 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_163 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_164 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_165 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_166 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_167 | 1.0 | 0.0 | 1.0 |
| HKFGBFPE_168 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_169 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_170 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_171 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_172 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_173 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_174 | 0.0 | 1.0 | 0.0 |
| HKFGBFPE_175 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HKFGBFPE_56 | 40721 | 57629 | False | Siphoviridae | VOG0707, VOG0198, VOG8647, VOG0189, VOG4693, VOG4039, VOG0198, VOG6183, VOG0866, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209 |
| HKFGBFPE_77 | 6925 | 22194 | False | Siphoviridae | VOG3490, VOG4714, VOG0198, VOG0204, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1406, VOG0267, VOG5458, VOG0650 |
Phigaro v2.4.0 (Database: Jan. 2024 release)