Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GBOGKNDM_95 | 49115 | 49309 | CspA | 8.72e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GBOGKNDM_1 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_2 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_9 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_16 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_17 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_19 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_20 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_21 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_22 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_23 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_24 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_25 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_26 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_27 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_28 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_29 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_30 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_31 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_32 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_33 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_34 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_35 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_36 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_37 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_38 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_39 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_40 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_41 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_42 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_43 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_44 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_45 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_46 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_47 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_48 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_49 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_50 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_51 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_52 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_53 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_54 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_56 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_57 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_58 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_59 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_60 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_61 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_64 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_65 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_66 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_67 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_68 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_71 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_74 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_76 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_77 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_78 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_79 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_80 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_81 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_83 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_85 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_86 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_87 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_89 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_95 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_96 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_98 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_99 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_100 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_101 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_102 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_103 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_104 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_105 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_106 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_107 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_108 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_109 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_110 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_111 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_112 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_113 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_114 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_115 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_116 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_117 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_118 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_119 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_120 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_121 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_122 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_123 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_127 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_132 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_133 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_134 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_138 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_139 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_141 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_142 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_146 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_151 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_155 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_158 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_160 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_168 | 1.0 | 0.0 | 1.0 |
| GBOGKNDM_170 | 0.0 | 1.0 | 0.0 |
| GBOGKNDM_171 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GBOGKNDM_41 | 3192 | 23896 | False | Siphoviridae | VOG0612, VOG10227, VOG0720, VOG4564, VOG0638, VOG4555, VOG1329, VOG4713, VOG1353, VOG0724, VOG0799, VOG0725, VOG4545, VOG0801, VOG3462, VOG10913, VOG4612, VOG5601, VOG6550 |
Phigaro v2.4.0 (Database: Jan. 2024 release)