Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BKIDPPBG_9 | 44282 | 43578 | WalR | 1.02e-114 | transcriptional regulatory protein | 83.83 | 100.00 | EPH95667 |
| BKIDPPBG_48 | 57586 | 57392 | CspR | 2.85e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| BKIDPPBG_48 | 57586 | 57389 | CspA | 4.37e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BKIDPPBG_56 | 4689 | 5618 | rep28 | 930 / 930 | 97.74 | CP003162 |
| BKIDPPBG_23 | 8578 | 9617 | rep38 | 1042 / 1104 | 88.48 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BKIDPPBG_5 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_7 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_9 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_12 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_14 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_16 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_18 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_20 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_23 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_24 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_25 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_26 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_27 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_28 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_29 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_31 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_33 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_34 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_35 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_36 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_37 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_38 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_39 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_40 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_41 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_42 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_43 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_44 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_45 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_46 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_47 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_48 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_49 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_50 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_51 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_52 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_53 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_54 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_55 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_56 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_57 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_58 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_59 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_60 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_61 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_62 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_63 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_64 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_65 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_67 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_68 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_69 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_70 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_72 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_73 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_74 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_75 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_76 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_77 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_79 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_80 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_81 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_83 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_86 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_87 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_88 | 0.0 | 1.0 | 0.0 |
| BKIDPPBG_90 | 1.0 | 0.0 | 1.0 |
| BKIDPPBG_91 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BKIDPPBG_14 | 10692 | 24164 | False | Siphoviridae | VOG0660, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG0044, VOG0044, VOG1298 |
| BKIDPPBG_34 | 2753 | 36760 | False | Siphoviridae | VOG0181, VOG7298, VOG2703, VOG1309, VOG0186, VOG0186, VOG4566, VOG4552, VOG4693, VOG0586, VOG0198, VOG9846, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294, VOG1637 |
| BKIDPPBG_57 | 5525 | 32182 | False | Siphoviridae | VOG4855, VOG0189, VOG6005, VOG0198, VOG2124, VOG3699, VOG10227, VOG0720, VOG4564, VOG10914, VOG1329, VOG4713, VOG9583, VOG0724, VOG0799, VOG0725, VOG6163, VOG4633, VOG4828, VOG4619, VOG4856, VOG9640, VOG0804, VOG4705, VOG4918, VOG0753 |
| BKIDPPBG_61 | 4474 | 20454 | False | Siphoviridae | VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG6721 |
Phigaro v2.4.0 (Database: Jan. 2024 release)