Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DFPABOIK_88 | 57799 | 57095 | WalR | 3.20e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| DFPABOIK_142 | 86003 | 85809 | CspR | 4.10e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| DFPABOIK_142 | 86003 | 85806 | CspA | 6.29e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DFPABOIK_8 | 4592 | 5521 | rep28 | 930 / 930 | 99.89 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DFPABOIK_1 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_2 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_8 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_14 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_15 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_16 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_19 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_20 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_22 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_23 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_24 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_26 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_28 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_30 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_31 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_34 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_35 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_36 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_37 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_40 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_41 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_44 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_45 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_50 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_51 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_54 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_55 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_58 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_59 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_61 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_62 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_64 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_67 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_68 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_72 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_74 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_79 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_82 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_85 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_88 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_91 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_93 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_94 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_96 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_97 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_98 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_100 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_101 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_102 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_103 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_104 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_105 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_107 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_108 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_109 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_110 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_111 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_112 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_113 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_114 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_115 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_116 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_118 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_119 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_120 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_121 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_122 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_123 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_124 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_126 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_128 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_129 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_130 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_131 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_132 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_133 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_134 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_136 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_138 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_139 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_140 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_141 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_142 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_143 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_144 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_145 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_146 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_147 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_149 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_150 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_151 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_152 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_154 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_155 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_157 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_158 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_159 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_160 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_161 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_162 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_166 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_167 | 0.0 | 1.0 | 0.0 |
| DFPABOIK_168 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_169 | 1.0 | 0.0 | 1.0 |
| DFPABOIK_171 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DFPABOIK_97 | 7205 | 29944 | False | Siphoviridae | VOG0535, VOG0322, VOG6545, VOG0514, VOG10904, VOG8647, VOG0189, VOG6005, VOG0198, VOG4187, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0660 |
Phigaro v2.4.0 (Database: Jan. 2024 release)