Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AEBEKBJC_87 | 81845 | 81141 | WalR | 7.15e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| AEBEKBJC_13 | 106238 | 106041 | CspR | 1.71e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AEBEKBJC_2 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_7 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_12 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_13 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_14 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_15 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_16 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_17 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_18 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_19 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_20 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_21 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_22 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_23 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_24 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_25 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_26 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_27 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_28 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_29 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_30 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_31 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_32 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_33 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_34 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_35 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_36 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_38 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_39 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_40 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_41 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_42 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_43 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_44 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_45 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_46 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_47 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_48 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_49 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_50 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_51 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_52 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_53 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_54 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_55 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_56 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_57 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_58 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_59 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_60 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_61 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_62 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_63 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_64 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_66 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_67 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_68 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_69 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_71 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_72 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_73 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_74 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_76 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_78 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_80 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_81 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_83 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_84 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_87 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_88 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_92 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_95 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_96 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_98 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_99 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_108 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_109 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_116 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_124 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_130 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_137 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_144 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_149 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_150 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_151 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_152 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_153 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_154 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_155 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_156 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_157 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_158 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_159 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_160 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_161 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_163 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_164 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_165 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_166 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_167 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_168 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_169 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_170 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_171 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_172 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_173 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_174 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_175 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_176 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_177 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_178 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_180 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_184 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_185 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_187 | 0.0 | 1.0 | 0.0 |
| AEBEKBJC_193 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_198 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_204 | 1.0 | 0.0 | 1.0 |
| AEBEKBJC_211 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AEBEKBJC_24 | 1216 | 19914 | False | Siphoviridae | VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637, VOG0054 |
| AEBEKBJC_31 | 68342 | 73032 | False | Unknown | VOG0283, VOG0226, VOG4566, VOG0189, VOG7018, VOG9860 |
| AEBEKBJC_151 | 744 | 22533 | False | Siphoviridae | VOG6579, VOG4570, VOG10904, VOG4549, VOG3699, VOG10227, VOG0720, VOG4555, VOG0694, VOG1322, VOG4713, VOG1320, VOG5660, VOG1321, VOG0799, VOG0725, VOG1323, VOG4545, VOG0801, VOG4619, VOG4683, VOG6455, VOG7896 |
| AEBEKBJC_160 | 2974 | 10501 | False | Siphoviridae | VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609 |
| AEBEKBJC_169 | 15242 | 21605 | False | Unknown | VOG3304, VOG0862, VOG5353, VOG4552, VOG10867, VOG4600, VOG1309 |
Phigaro v2.4.0 (Database: Jan. 2024 release)