Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MACPCDBC_36 | 63925 | 64629 | WalR | 5.35e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MACPCDBC_57 | 94307 | 94110 | CspR | 1.52e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MACPCDBC_1 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_2 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_6 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_7 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_8 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_9 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_13 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_18 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_21 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_23 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_27 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_32 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_34 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_36 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_38 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_40 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_42 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_46 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_47 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_49 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_52 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_53 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_54 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_56 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_57 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_59 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_60 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_61 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_62 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_63 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_64 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_65 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_66 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_67 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_68 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_69 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_70 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_71 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_72 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_73 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_74 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_75 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_76 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_77 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_78 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_79 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_80 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_81 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_82 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_83 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_84 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_85 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_86 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_87 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_89 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_90 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_91 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_92 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_93 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_94 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_95 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_96 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_97 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_98 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_99 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_100 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_101 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_103 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_106 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_108 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_109 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_110 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_111 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_112 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_113 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_114 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_115 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_118 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_119 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_120 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_121 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_123 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_125 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_126 | 0.0 | 1.0 | 0.0 |
| MACPCDBC_127 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_128 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_129 | 1.0 | 0.0 | 1.0 |
| MACPCDBC_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MACPCDBC_130 | 2054 | 24253 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG5852, VOG6163, VOG4605, VOG4599, VOG4705, VOG1637, VOG0703, VOG4918, VOG4573 |
| MACPCDBC_130 | 42083 | 72385 | False | Siphoviridae | VOG4602, VOG6495, VOG5353, VOG4552, VOG4552, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG4900, VOG5998, VOG6795, VOG5562, VOG4693, VOG0744, VOG4673, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG5793, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)