Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CCFMLPHG_151 | 58674 | 59378 | WalR | 4.71e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| CCFMLPHG_212 | 13788 | 13985 | CspR | 5.43e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CCFMLPHG_1 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_2 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_3 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_4 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_5 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_6 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_7 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_8 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_9 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_12 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_13 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_14 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_15 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_16 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_17 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_18 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_21 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_22 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_23 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_24 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_25 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_26 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_27 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_28 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_29 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_30 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_31 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_32 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_34 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_35 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_36 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_37 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_38 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_39 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_40 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_41 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_42 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_43 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_44 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_45 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_46 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_48 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_50 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_51 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_52 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_53 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_55 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_56 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_57 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_58 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_59 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_64 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_65 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_66 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_67 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_68 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_69 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_70 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_71 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_72 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_73 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_74 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_76 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_77 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_78 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_79 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_80 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_82 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_83 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_85 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_87 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_88 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_91 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_94 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_97 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_98 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_100 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_101 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_105 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_108 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_112 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_113 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_114 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_115 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_116 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_117 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_118 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_120 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_121 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_123 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_126 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_128 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_131 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_133 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_134 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_138 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_139 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_140 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_142 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_144 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_147 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_148 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_151 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_153 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_154 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_155 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_159 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_162 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_163 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_166 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_170 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_173 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_174 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_175 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_176 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_177 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_178 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_179 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_180 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_181 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_182 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_185 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_186 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_187 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_189 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_192 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_193 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_194 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_195 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_196 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_197 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_198 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_199 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_200 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_201 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_202 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_203 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_204 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_205 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_207 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_208 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_209 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_210 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_211 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_212 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_213 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_214 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_215 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_216 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_217 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_218 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_219 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_220 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_221 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_222 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_223 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_224 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_225 | 0.0 | 1.0 | 0.0 |
| CCFMLPHG_226 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_227 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_228 | 1.0 | 0.0 | 1.0 |
| CCFMLPHG_230 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CCFMLPHG_154 | 181 | 22678 | False | Siphoviridae | VOG0703, VOG7888, VOG7896, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG1183, VOG1300, VOG4564, VOG0720, VOG4544, VOG3699, VOG4570 |
| CCFMLPHG_224 | 12268 | 18977 | False | Unknown | VOG2338, VOG1309, VOG0186, VOG4566, VOG11003, VOG9860, VOG0536 |
Phigaro v2.4.0 (Database: Jan. 2024 release)