Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NBIMPABH_1 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_2 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_3 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_4 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_10 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_12 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_14 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_21 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_22 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_23 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_24 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_25 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_27 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_28 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_29 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_30 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_31 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_32 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_33 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_34 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_36 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_37 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_38 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_39 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_40 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_41 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_43 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_44 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_45 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_47 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_48 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_49 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_52 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_55 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_61 | 0.0 | 1.0 | 0.0 |
| NBIMPABH_64 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_67 | 1.0 | 0.0 | 1.0 |
| NBIMPABH_68 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NBIMPABH_24 | 105011 | 140582 | False | Myoviridae | VOG8294, VOG0703, VOG9888, VOG8917, VOG4705, VOG9945, VOG6540, VOG4687, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4545, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4711, VOG10914, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG4104, VOG0634, VOG5733, VOG0635, VOG4853, VOG9667, VOG0189, VOG4566, VOG0906, VOG0321, VOG1250, VOG1353, VOG7225, VOG4552 |
| NBIMPABH_28 | 63707 | 90101 | False | Siphoviridae | VOG4693, VOG0198, VOG8281, VOG3477, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG1333, VOG0800, VOG4598, VOG4633, VOG6163, VOG5283 |
Phigaro v2.4.0 (Database: Jan. 2024 release)