Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IFNIJOJJ_1 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_2 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_3 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_4 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_5 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_6 | 1.0 | 0.0 | 1.0 |
| IFNIJOJJ_7 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_8 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_10 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_11 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_12 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_13 | 1.0 | 0.0 | 1.0 |
| IFNIJOJJ_14 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_16 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_18 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_19 | 1.0 | 0.0 | 1.0 |
| IFNIJOJJ_21 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_22 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_23 | 1.0 | 0.0 | 1.0 |
| IFNIJOJJ_24 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_27 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_29 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_32 | 1.0 | 0.0 | 1.0 |
| IFNIJOJJ_37 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_43 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_45 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_50 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_52 | 0.0 | 1.0 | 0.0 |
| IFNIJOJJ_54 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IFNIJOJJ_3 | 54073 | 81972 | False | Siphoviridae | VOG5087, VOG0861, VOG0648, VOG5007, VOG10608, VOG1335, VOG1334, VOG1333, VOG4634, VOG0704, VOG0539, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG7038, VOG0720, VOG4544, VOG0796, VOG4732, VOG0198, VOG4552 |
| IFNIJOJJ_37 | 155597 | 181178 | False | Siphoviridae | VOG0198, VOG10142, VOG0796, VOG10227, VOG0720, VOG4564, VOG7533, VOG10914, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG1333, VOG0800, VOG4598, VOG4633, VOG6163, VOG5283, VOG9657, VOG0861, VOG5087, VOG0686, VOG0703 |
| IFNIJOJJ_37 | 218814 | 256908 | False | Myoviridae | VOG9667, VOG3998, VOG3478, VOG0685, VOG0283, VOG4566, VOG7897, VOG7236, VOG0635, VOG5545, VOG0635, VOG6972, VOG3307, VOG0634, VOG4693, VOG6253, VOG0198, VOG1345, VOG4618, VOG4571, VOG1517, VOG4544, VOG0720, VOG4564, VOG4555, VOG4572, VOG4623, VOG3888, VOG1900, VOG4870, VOG5612, VOG3890, VOG3891, VOG3892, VOG3636, VOG4865, VOG4885, VOG3894, VOG4691, VOG4862, VOG10969, VOG9945, VOG4705, VOG0861, VOG5087, VOG0703, VOG8294 |
Phigaro v2.4.0 (Database: Jan. 2024 release)