Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JALKKPJM_246 | 10685 | 10488 | CspA | 2.69e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| JALKKPJM_246 | 10685 | 10488 | CspR | 2.82e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JALKKPJM_1 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_2 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_3 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_4 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_5 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_6 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_8 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_9 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_10 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_11 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_12 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_13 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_15 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_16 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_17 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_18 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_20 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_21 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_22 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_23 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_24 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_25 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_26 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_27 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_28 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_29 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_30 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_31 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_35 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_36 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_37 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_39 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_40 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_42 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_43 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_44 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_45 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_47 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_48 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_49 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_50 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_51 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_52 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_53 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_54 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_56 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_57 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_58 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_59 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_60 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_61 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_62 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_63 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_64 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_65 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_66 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_67 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_68 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_69 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_70 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_71 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_72 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_73 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_74 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_75 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_76 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_77 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_79 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_80 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_81 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_82 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_83 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_84 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_85 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_86 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_87 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_88 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_89 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_90 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_91 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_92 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_93 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_94 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_95 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_97 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_98 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_99 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_100 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_101 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_102 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_103 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_105 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_106 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_107 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_108 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_109 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_110 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_111 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_112 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_113 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_114 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_115 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_116 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_117 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_118 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_119 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_120 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_122 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_124 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_125 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_126 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_127 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_128 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_129 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_130 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_131 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_133 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_134 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_136 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_138 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_139 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_140 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_144 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_145 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_147 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_148 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_150 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_153 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_154 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_155 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_158 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_159 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_160 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_161 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_162 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_163 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_164 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_165 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_166 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_167 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_168 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_169 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_172 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_173 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_174 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_175 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_176 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_177 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_178 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_179 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_180 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_181 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_182 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_184 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_188 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_189 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_191 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_192 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_193 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_194 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_195 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_196 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_198 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_199 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_202 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_203 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_204 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_209 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_210 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_212 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_213 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_214 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_215 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_217 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_218 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_219 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_220 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_221 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_223 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_224 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_227 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_228 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_230 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_231 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_232 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_233 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_235 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_236 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_238 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_240 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_243 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_246 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_255 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_259 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_269 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_272 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_274 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_276 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_277 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_278 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_279 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_280 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_281 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_282 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_284 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_286 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_288 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_289 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_290 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_291 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_292 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_293 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_294 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_296 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_297 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_298 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_300 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_301 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_302 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_303 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_305 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_306 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_307 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_308 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_310 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_311 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_312 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_313 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_314 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_315 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_316 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_317 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_318 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_319 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_320 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_321 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_322 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_324 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_325 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_326 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_327 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_328 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_329 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_331 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_332 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_333 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_334 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_335 | 1.0 | 0.0 | 1.0 |
| JALKKPJM_337 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_338 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_339 | 0.0 | 1.0 | 0.0 |
| JALKKPJM_340 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JALKKPJM_291 | 6071 | 21458 | False | Myoviridae | VOG3738, VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG6431 |
| JALKKPJM_340 | 3260 | 45108 | False | Siphoviridae | VOG0221, VOG9859, VOG4602, VOG6495, VOG6171, VOG4552, VOG0535, VOG0283, VOG0226, VOG4566, VOG0189, VOG8685, VOG4693, VOG8152, VOG4559, VOG4010, VOG0198, VOG0689, VOG0796, VOG10227, VOG0691, VOG0692, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4545, VOG0801, VOG4619, VOG10972, VOG9997, VOG2037, VOG4856, VOG10223, VOG1637, VOG0703, VOG4824, VOG3303, VOG7674, VOG2765 |
Phigaro v2.4.0 (Database: Jan. 2024 release)