Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CJDBDFBO_219 | 73555 | 73752 | CspA | 1.58e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| CJDBDFBO_219 | 73555 | 73749 | CspR | 6.85e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CJDBDFBO_3 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_4 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_5 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_7 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_9 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_10 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_11 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_13 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_14 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_15 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_17 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_18 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_19 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_20 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_21 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_22 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_23 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_24 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_25 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_27 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_28 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_30 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_33 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_34 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_36 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_37 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_38 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_39 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_40 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_44 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_47 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_48 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_49 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_50 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_53 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_56 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_57 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_58 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_59 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_60 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_61 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_62 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_63 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_64 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_65 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_67 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_68 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_69 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_70 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_71 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_72 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_73 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_76 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_77 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_78 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_79 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_80 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_81 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_82 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_86 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_88 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_89 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_90 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_91 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_93 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_95 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_96 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_97 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_98 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_101 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_102 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_103 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_104 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_105 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_107 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_108 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_111 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_113 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_115 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_116 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_117 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_119 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_120 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_122 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_123 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_124 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_125 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_127 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_130 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_131 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_134 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_138 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_141 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_143 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_145 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_147 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_148 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_149 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_150 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_152 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_153 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_157 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_162 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_164 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_166 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_170 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_173 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_175 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_178 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_179 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_188 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_190 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_198 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_201 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_204 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_205 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_206 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_207 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_208 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_210 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_211 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_212 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_213 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_215 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_217 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_218 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_219 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_220 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_222 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_223 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_224 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_225 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_226 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_227 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_228 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_229 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_230 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_231 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_232 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_233 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_234 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_235 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_236 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_237 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_239 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_240 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_241 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_243 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_244 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_245 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_247 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_248 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_249 | 1.0 | 0.0 | 1.0 |
| CJDBDFBO_250 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_252 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_253 | 0.0 | 1.0 | 0.0 |
| CJDBDFBO_254 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CJDBDFBO_229 | 22761 | 47628 | False | Siphoviridae | VOG4615, VOG0703, VOG1637, VOG4687, VOG11074, VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG6163, VOG0209, VOG0207, VOG4317, VOG0205, VOG0204, VOG4568, VOG4556, VOG10142, VOG1886, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)