Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GKJEPJLG_190 | 3491 | 3294 | CspA | 2.72e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| GKJEPJLG_190 | 3491 | 3297 | CspR | 1.18e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GKJEPJLG_2 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_4 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_5 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_6 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_7 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_9 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_10 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_11 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_12 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_13 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_14 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_15 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_16 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_17 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_18 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_19 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_20 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_21 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_22 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_24 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_25 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_27 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_28 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_29 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_30 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_31 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_32 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_33 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_34 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_35 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_36 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_38 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_39 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_40 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_41 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_42 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_45 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_46 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_47 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_52 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_53 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_55 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_56 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_58 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_59 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_60 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_61 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_62 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_63 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_64 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_66 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_67 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_70 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_71 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_73 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_74 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_75 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_76 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_77 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_78 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_79 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_82 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_85 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_86 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_87 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_90 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_91 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_92 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_93 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_97 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_98 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_102 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_103 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_106 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_107 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_108 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_109 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_110 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_111 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_114 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_117 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_123 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_126 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_127 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_130 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_135 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_136 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_139 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_140 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_148 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_151 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_161 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_167 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_174 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_181 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_182 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_183 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_185 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_186 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_188 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_189 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_190 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_191 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_192 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_195 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_197 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_199 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_200 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_201 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_202 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_203 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_204 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_205 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_206 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_208 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_209 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_210 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_211 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_212 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_213 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_214 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_215 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_216 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_217 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_218 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_219 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_220 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_221 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_222 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_223 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_224 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_225 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_226 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_227 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_228 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_229 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_230 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_232 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_233 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_235 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_236 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_237 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_239 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_240 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_241 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_242 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_244 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_245 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_246 | 0.0 | 1.0 | 0.0 |
| GKJEPJLG_247 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_249 | 1.0 | 0.0 | 1.0 |
| GKJEPJLG_250 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)