Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NMKOJDNB_316 | 3466 | 3269 | CspA | 2.70e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| NMKOJDNB_316 | 3466 | 3272 | CspR | 1.17e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NMKOJDNB_2 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_3 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_4 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_7 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_8 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_10 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_11 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_12 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_14 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_15 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_16 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_17 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_18 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_19 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_20 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_21 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_22 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_23 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_24 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_25 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_26 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_27 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_28 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_29 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_30 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_31 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_33 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_34 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_35 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_36 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_37 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_38 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_39 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_40 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_41 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_42 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_43 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_45 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_46 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_47 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_49 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_50 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_53 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_54 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_55 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_58 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_60 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_61 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_62 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_63 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_65 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_67 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_68 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_69 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_72 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_74 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_75 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_76 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_81 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_82 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_85 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_86 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_88 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_89 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_93 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_95 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_97 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_99 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_100 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_103 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_105 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_106 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_107 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_109 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_110 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_112 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_113 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_116 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_122 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_123 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_125 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_126 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_127 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_128 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_129 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_132 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_137 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_138 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_141 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_142 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_144 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_147 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_148 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_150 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_155 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_156 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_157 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_159 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_160 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_164 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_166 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_167 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_168 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_172 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_173 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_174 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_175 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_176 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_177 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_178 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_179 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_180 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_181 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_182 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_183 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_184 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_185 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_186 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_187 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_188 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_189 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_190 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_191 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_193 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_194 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_195 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_196 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_197 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_198 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_199 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_200 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_201 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_202 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_204 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_205 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_206 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_207 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_208 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_209 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_210 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_211 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_213 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_214 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_215 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_216 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_217 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_221 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_222 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_223 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_224 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_225 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_226 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_227 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_228 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_231 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_233 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_235 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_236 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_237 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_239 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_240 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_242 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_243 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_244 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_245 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_250 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_251 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_253 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_255 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_256 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_260 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_261 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_262 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_263 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_265 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_268 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_271 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_274 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_277 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_284 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_291 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_293 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_294 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_295 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_297 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_298 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_299 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_300 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_301 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_302 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_303 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_304 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_305 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_306 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_307 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_309 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_310 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_311 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_312 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_313 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_314 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_315 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_316 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_317 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_318 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_320 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_321 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_322 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_323 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_324 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_325 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_326 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_327 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_328 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_329 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_330 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_331 | 0.0 | 1.0 | 0.0 |
| NMKOJDNB_332 | 1.0 | 0.0 | 1.0 |
| NMKOJDNB_333 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NMKOJDNB_328 | 13893 | 19954 | False | Unknown | VOG0420, VOG0020, VOG9629 |
Phigaro v2.4.0 (Database: Jan. 2024 release)