Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DEIKLKBD_70 | 7297 | 7100 | CspA | 3.26e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| DEIKLKBD_70 | 7297 | 7100 | CspR | 3.42e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DEIKLKBD_2 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_3 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_4 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_5 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_6 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_7 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_8 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_9 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_10 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_11 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_13 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_15 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_16 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_17 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_18 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_19 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_20 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_21 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_22 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_23 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_25 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_26 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_27 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_28 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_29 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_30 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_31 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_33 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_34 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_36 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_38 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_39 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_40 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_41 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_42 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_43 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_44 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_45 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_47 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_48 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_50 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_52 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_53 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_56 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_57 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_58 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_60 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_62 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_63 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_64 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_65 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_66 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_67 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_68 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_70 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_71 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_72 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_75 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_76 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_79 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_80 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_88 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_92 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_94 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_95 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_96 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_98 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_100 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_102 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_106 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_109 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_110 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_113 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_117 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_118 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_119 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_120 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_121 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_122 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_123 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_127 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_130 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_132 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_133 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_134 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_135 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_137 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_138 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_140 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_142 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_145 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_149 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_150 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_151 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_155 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_156 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_157 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_163 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_165 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_166 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_167 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_168 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_169 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_170 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_171 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_172 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_173 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_175 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_177 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_179 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_181 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_182 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_183 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_184 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_186 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_187 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_189 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_190 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_191 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_192 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_193 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_194 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_195 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_196 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_197 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_198 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_199 | 0.0 | 1.0 | 0.0 |
| DEIKLKBD_200 | 1.0 | 0.0 | 1.0 |
| DEIKLKBD_201 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DEIKLKBD_133 | 6290 | 19497 | False | Siphoviridae | VOG0205, VOG0226, VOG6085, VOG6431, VOG0025, VOG8295, VOG1176, VOG10457 |
Phigaro v2.4.0 (Database: Jan. 2024 release)