Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INDAJKKA_3 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_5 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_6 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_8 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_10 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_11 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_15 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_16 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_17 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_18 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_19 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_21 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_24 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_27 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_28 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_30 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_35 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_37 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_39 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_41 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_43 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_46 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_47 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_49 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_50 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_51 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_52 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_54 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_56 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_57 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_58 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_60 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_61 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_62 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_63 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_64 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_65 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_66 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_67 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_68 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_69 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_70 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_71 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_72 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_73 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_75 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_76 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_77 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_78 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_80 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_81 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_83 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_84 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_85 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_87 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_88 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_89 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_90 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_92 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_94 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_96 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_97 | 1.0 | 0.0 | 1.0 |
| INDAJKKA_98 | 0.0 | 1.0 | 0.0 |
| INDAJKKA_99 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INDAJKKA_21 | 27669 | 36568 | False | Myoviridae | VOG9629, VOG0020, VOG0583, VOG0189, VOG0322 |
| INDAJKKA_35 | 33539 | 40239 | False | Myoviridae | VOG0226, VOG0384, VOG0382 |
| INDAJKKA_61 | 14269 | 17854 | False | Myoviridae | VOG4410, VOG6396 |
Phigaro v2.4.0 (Database: Jan. 2024 release)