Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GAEIJOLE_6 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_7 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_14 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_15 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_20 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_21 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_23 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_24 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_25 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_26 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_27 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_28 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_29 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_31 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_32 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_34 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_36 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_37 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_38 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_39 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_40 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_41 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_43 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_44 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_45 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_46 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_47 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_48 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_49 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_50 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_51 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_52 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_53 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_54 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_55 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_56 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_57 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_59 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_60 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_62 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_63 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_64 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_65 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_66 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_67 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_69 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_70 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_74 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_76 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_78 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_80 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_81 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_82 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_83 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_84 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_85 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_86 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_87 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_89 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_90 | 1.0 | 0.0 | 1.0 |
| GAEIJOLE_93 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_94 | 0.0 | 1.0 | 0.0 |
| GAEIJOLE_96 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GAEIJOLE_21 | 14261 | 17846 | False | Myoviridae | VOG4410, VOG6396 |
| GAEIJOLE_36 | 27661 | 36560 | False | Myoviridae | VOG9629, VOG0020, VOG0583, VOG0189, VOG0322 |
| GAEIJOLE_41 | 8826 | 15526 | False | Myoviridae | VOG0348, VOG0382, VOG0384 |
Phigaro v2.4.0 (Database: Jan. 2024 release)