Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HMCEBGJN_73 | 1071 | 1716 | rep38 | 651 / 903 | 87.56 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HMCEBGJN_2 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_3 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_9 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_18 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_19 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_29 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_32 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_37 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_44 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_50 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_51 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_52 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_53 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_54 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_55 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_56 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_58 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_59 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_60 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_61 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_62 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_63 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_64 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_65 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_66 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_67 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_69 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_70 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_71 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_73 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_75 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_76 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_77 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_80 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_81 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_83 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_84 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_85 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_87 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_88 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_89 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_90 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_91 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_92 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_93 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_94 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_95 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_96 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_98 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_99 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_100 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_102 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_103 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_104 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_105 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_106 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_107 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_108 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_109 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_110 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_111 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_112 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_113 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_114 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_115 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_117 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_119 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_120 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_121 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_123 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_126 | 1.0 | 0.0 | 1.0 |
| HMCEBGJN_127 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_128 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_129 | 0.0 | 1.0 | 0.0 |
| HMCEBGJN_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HMCEBGJN_51 | 14261 | 17846 | False | Myoviridae | VOG4410, VOG6396 |
Phigaro v2.4.0 (Database: Jan. 2024 release)