Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CGBLNABC_4 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_6 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_15 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_16 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_20 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_21 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_23 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_35 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_36 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_38 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_39 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_41 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_42 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_43 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_44 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_45 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_46 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_47 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_48 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_49 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_50 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_53 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_55 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_57 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_59 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_60 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_61 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_62 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_63 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_64 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_65 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_67 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_68 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_69 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_70 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_71 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_72 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_74 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_75 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_76 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_78 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_79 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_80 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_81 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_82 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_83 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_84 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_85 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_86 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_87 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_88 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_89 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_90 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_91 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_92 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_93 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_94 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_95 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_96 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_97 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_98 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_101 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_103 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_104 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_106 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_107 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_108 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_109 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_110 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_111 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_113 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_115 | 1.0 | 0.0 | 1.0 |
| CGBLNABC_116 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_117 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_118 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_123 | 0.0 | 1.0 | 0.0 |
| CGBLNABC_124 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CGBLNABC_50 | 11723 | 20192 | False | Myoviridae | VOG0583, VOG0189, VOG0322, VOG6282 |
| CGBLNABC_65 | 10954 | 16528 | False | Myoviridae | VOG0384, VOG0382 |
| CGBLNABC_82 | 14276 | 17861 | False | Myoviridae | VOG4410, VOG6396 |
Phigaro v2.4.0 (Database: Jan. 2024 release)