Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IMECFCMK_58 | 21031 | 21732 | WalR | 3.98e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IMECFCMK_36 | 8228 | 9157 | rep28 | 930 / 930 | 98.60 | CP003162 |
| IMECFCMK_108 | 621 | 1174 | rep38 | 556 / 903 | 90.47 | CP005943 |
| IMECFCMK_157 | 1787 | 2742 | repUS64 | 960 / 954 | 84.79 | JN601038 |
| IMECFCMK_30 | 216 | 1352 | rep32 | 1154 / 1161 | 81.89 | AL592102 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMECFCMK_1 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_6 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_9 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_11 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_14 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_17 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_20 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_23 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_25 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_30 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_31 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_32 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_33 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_34 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_35 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_36 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_37 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_38 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_39 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_40 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_41 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_42 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_43 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_44 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_45 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_46 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_47 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_48 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_49 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_50 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_52 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_53 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_54 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_55 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_56 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_58 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_59 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_60 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_61 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_62 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_63 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_64 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_65 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_66 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_67 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_68 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_69 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_70 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_71 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_72 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_73 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_74 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_75 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_76 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_77 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_79 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_81 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_82 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_83 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_84 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_85 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_86 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_87 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_88 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_90 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_91 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_92 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_93 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_94 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_95 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_96 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_97 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_99 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_100 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_101 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_102 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_103 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_104 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_105 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_107 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_108 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_109 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_110 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_111 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_112 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_113 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_114 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_115 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_116 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_117 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_121 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_122 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_124 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_125 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_126 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_130 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_131 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_132 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_133 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_134 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_137 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_139 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_140 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_141 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_142 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_143 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_144 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_145 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_146 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_147 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_148 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_149 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_150 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_151 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_152 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_153 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_154 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_155 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_156 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_157 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_161 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_162 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_164 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_165 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_166 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_168 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_169 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_172 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_173 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_174 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_177 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_179 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_180 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_181 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_183 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_185 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_191 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_194 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_195 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_200 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_201 | 0.0 | 1.0 | 0.0 |
| IMECFCMK_203 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_204 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_208 | 1.0 | 0.0 | 1.0 |
| IMECFCMK_210 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IMECFCMK_35 | 5583 | 37301 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG5904, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0198, VOG1183, VOG5733, VOG0044, VOG9326, VOG0195, VOG0052, VOG0189, VOG4799, VOG0514, VOG0226, VOG0283, VOG0321, VOG9846 |
| IMECFCMK_161 | 4551 | 15229 | False | Unknown | VOG0650, VOG0685, VOG0322, VOG4548, VOG0226, VOG4606, VOG0044, VOG3643, VOG8360 |
Phigaro v2.4.0 (Database: Jan. 2024 release)