Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NKCLILAI_1 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_2 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_4 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_5 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_8 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_10 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_11 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_12 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_13 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_14 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_16 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_17 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_18 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_19 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_20 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_21 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_22 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_23 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_24 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_25 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_26 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_27 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_28 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_29 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_30 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_33 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_34 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_35 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_37 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_39 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_41 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_42 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_51 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_53 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_54 | 1.0 | 0.0 | 1.0 |
| NKCLILAI_55 | 0.0 | 1.0 | 0.0 |
| NKCLILAI_56 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NKCLILAI_4 | 10164 | 31079 | False | Myoviridae | VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4710, VOG1353, VOG1883, VOG1352, VOG4699, VOG8263, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550 |
| NKCLILAI_29 | 5872 | 32654 | False | Myoviridae | VOG0638, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG6132, VOG1942, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG1710, VOG3179, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG4555, VOG4916 |
| NKCLILAI_56 | 2361 | 23215 | False | Myoviridae | VOG4862, VOG4691, VOG4550, VOG3894, VOG4885, VOG4865, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG4711, VOG4555, VOG4564, VOG0720, VOG4544, VOG3699, VOG3691, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)