Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NKCAPLPD_144 | 66217 | 66020 | CspA | 1.46e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| NKCAPLPD_144 | 66217 | 66023 | CspR | 6.32e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NKCAPLPD_2 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_3 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_4 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_5 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_6 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_7 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_8 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_9 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_10 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_11 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_12 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_15 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_16 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_18 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_19 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_20 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_21 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_22 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_24 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_25 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_26 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_27 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_28 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_29 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_30 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_31 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_32 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_34 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_35 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_36 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_37 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_38 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_39 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_40 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_41 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_43 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_44 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_45 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_49 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_50 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_52 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_53 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_54 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_57 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_59 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_60 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_61 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_62 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_65 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_66 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_67 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_68 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_69 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_71 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_73 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_75 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_76 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_77 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_78 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_80 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_83 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_84 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_89 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_90 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_91 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_92 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_94 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_95 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_98 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_101 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_102 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_103 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_105 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_106 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_107 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_109 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_110 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_111 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_113 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_115 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_117 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_118 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_120 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_122 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_123 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_126 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_128 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_129 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_132 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_134 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_135 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_136 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_137 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_140 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_142 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_144 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_145 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_149 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_151 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_152 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_153 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_154 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_156 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_161 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_162 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_163 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_165 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_168 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_172 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_176 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_178 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_181 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_183 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_187 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_189 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_191 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_192 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_194 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_196 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_197 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_201 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_203 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_208 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_210 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_212 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_213 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_214 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_218 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_219 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_221 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_225 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_227 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_228 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_229 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_230 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_231 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_232 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_234 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_236 | 1.0 | 0.0 | 1.0 |
| NKCAPLPD_237 | 0.0 | 1.0 | 0.0 |
| NKCAPLPD_238 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NKCAPLPD_60 | 3369 | 23553 | False | Siphoviridae | VOG0052, VOG10679, VOG7438, VOG1047, VOG1047, VOG0021, VOG8855, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581, VOG4571, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502 |
| NKCAPLPD_118 | 22790 | 30829 | False | Siphoviridae | VOG0275, VOG4585, VOG1159, VOG4677 |
Phigaro v2.4.0 (Database: Jan. 2024 release)