Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PDCPOIID_93 | 28929 | 29633 | WalR | 4.20e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| PDCPOIID_6 | 19136 | 19333 | CspR | 7.39e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PDCPOIID_1 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_2 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_3 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_4 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_5 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_6 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_7 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_8 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_9 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_10 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_11 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_12 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_13 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_14 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_15 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_16 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_17 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_18 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_19 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_20 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_21 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_22 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_23 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_24 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_25 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_26 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_27 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_28 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_29 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_30 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_31 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_32 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_33 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_34 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_36 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_37 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_38 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_39 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_40 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_41 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_42 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_44 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_45 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_46 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_47 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_48 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_49 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_50 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_51 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_53 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_54 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_55 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_56 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_58 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_59 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_60 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_61 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_65 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_66 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_69 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_70 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_71 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_72 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_73 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_74 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_75 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_79 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_80 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_83 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_86 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_87 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_89 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_92 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_93 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_94 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_95 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_98 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_99 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_100 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_103 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_106 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_110 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_111 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_113 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_117 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_120 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_121 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_122 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_123 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_126 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_127 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_130 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_131 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_132 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_133 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_135 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_136 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_137 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_138 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_139 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_140 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_141 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_142 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_143 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_144 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_145 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_146 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_147 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_148 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_149 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_150 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_151 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_155 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_156 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_157 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_158 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_159 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_161 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_162 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_163 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_164 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_165 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_166 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_167 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_168 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_169 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_170 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_171 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_172 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_173 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_174 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_175 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_176 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_177 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_178 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_179 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_180 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_182 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_183 | 1.0 | 0.0 | 1.0 |
| PDCPOIID_184 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_185 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_186 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_187 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_188 | 0.0 | 1.0 | 0.0 |
| PDCPOIID_189 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PDCPOIID_38 | 17891 | 28938 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)