Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FHKKNMFK_238 | 26950 | 26246 | WalR | 3.23e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FHKKNMFK_17 | 4619 | 4422 | CspR | 1.95e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FHKKNMFK_79 | 191 | 1147 | repUS64 | 958 / 954 | 92.59 | JN601038 |
| FHKKNMFK_280 | 10762 | 11823 | repUS74 | 1064 / 1062 | 92.20 | CP000424 |
| FHKKNMFK_259 | 3568 | 4602 | rep38 | 1039 / 1104 | 83.83 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FHKKNMFK_1 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_2 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_3 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_4 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_5 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_6 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_8 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_9 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_10 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_11 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_12 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_13 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_14 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_15 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_16 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_17 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_19 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_20 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_21 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_22 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_23 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_24 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_25 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_26 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_28 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_30 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_31 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_32 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_33 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_34 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_35 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_37 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_38 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_39 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_40 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_41 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_42 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_43 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_44 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_45 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_47 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_48 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_50 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_51 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_52 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_53 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_54 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_55 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_56 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_57 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_58 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_59 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_60 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_64 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_65 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_66 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_67 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_69 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_70 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_71 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_72 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_73 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_74 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_75 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_76 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_78 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_79 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_80 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_81 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_82 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_84 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_85 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_86 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_87 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_88 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_90 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_91 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_92 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_93 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_94 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_96 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_99 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_100 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_101 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_103 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_105 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_106 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_107 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_108 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_110 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_111 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_112 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_113 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_114 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_115 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_116 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_117 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_118 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_119 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_121 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_123 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_124 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_125 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_126 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_128 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_129 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_130 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_132 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_134 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_135 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_136 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_137 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_140 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_141 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_142 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_143 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_144 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_145 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_147 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_148 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_149 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_150 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_153 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_155 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_157 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_159 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_160 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_163 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_169 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_172 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_173 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_174 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_175 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_182 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_184 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_188 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_190 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_191 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_193 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_198 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_200 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_203 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_206 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_207 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_209 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_211 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_214 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_215 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_221 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_225 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_227 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_231 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_233 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_234 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_235 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_236 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_238 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_243 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_245 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_246 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_247 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_249 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_252 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_253 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_254 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_255 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_256 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_257 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_258 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_259 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_260 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_261 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_262 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_263 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_264 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_265 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_266 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_267 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_268 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_269 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_270 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_271 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_272 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_273 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_274 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_275 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_277 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_278 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_279 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_280 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_281 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_282 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_283 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_284 | 1.0 | 0.0 | 1.0 |
| FHKKNMFK_285 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_286 | 0.0 | 1.0 | 0.0 |
| FHKKNMFK_287 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FHKKNMFK_215 | 2708 | 20581 | False | Siphoviridae | VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG2935, VOG1886, VOG4581, VOG0195 |
| FHKKNMFK_236 | 642 | 21157 | False | Siphoviridae | VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG8550, VOG4545, VOG4605, VOG4599, VOG4599, VOG6455, VOG7896, VOG1637 |
| FHKKNMFK_262 | 4815 | 8060 | False | Siphoviridae | VOG0189, VOG4799, VOG10867 |
Phigaro v2.4.0 (Database: Jan. 2024 release)